Pairwise Alignments

Query, 370 a.a., permease YjgP/YjgQ family protein (RefSeq) from Shewanella loihica PV-4

Subject, 366 a.a., LPS export ABC transporter permease LptF from Vibrio cholerae E7946 ATCC 55056

 Score =  278 bits (712), Expect = 1e-79
 Identities = 142/369 (38%), Positives = 230/369 (62%), Gaps = 3/369 (0%)

Query: 1   MIVFRYLIREVLKAQMAVLLVLLAIFISQHFVRVLADASDGEFPASLVMTLLGLNLPYLA 60
           MI+ RYLIRE +K+Q A+  VL  +F+SQ F+RVLADASDGE P S++++++GLN+P + 
Sbjct: 1   MIIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMG 60

Query: 61  VLVVPLSLFLGILVAHGRMYAESEMVVFHSVGVSEWYVTRVTLLLAVANMLFTGFLVIYV 120
           +L++PLSL++GIL+  GR+YAESE+ V ++ G+   ++ R  L LA+       F  +++
Sbjct: 61  LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120

Query: 121 TPWAEETQNRVLENAQSEAGLAALTQGRFQTSPNGRAVLFVERIGRDNQLDKVFVAQLPD 180
            PW+++ +  ++E   +E  +  L +G FQ SP+G +V+F++ I  + +L  VFVAQL  
Sbjct: 121 APWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNI-ENRKLYNVFVAQLA- 178

Query: 181 PEDGASQSNIVVAQGGSVIEDESGEQRLKLNDGIQYQSKQNQLDYQVVQFAGYEMQIKEQ 240
           P D    S ++ +  G V E   G Q + L DG +Y+    ++DY +  F  Y+  I ++
Sbjct: 179 PRDSILPS-VMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQR 237

Query: 241 EVDQRRRKLSALPIDQLLDTEGPEAVAEFHWRLAIPLAIPFMTLIAVPMARVNVRQGKFA 300
           EV    R   ALP   LL+     A AE  WR+++ + IP +T++ VP++ VN RQG+FA
Sbjct: 238 EVKSAERDWEALPTLSLLNNADRRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQGRFA 297

Query: 301 KMFPAILLYLGYFGLMIAGRKALEDEVIPAYLGMWWIHASALFLGMLLLSKERPAGAKLS 360
           KM PAIL+YL YF  + A + A+ED  +P  +G+W I+A+ L   +++ + +     +  
Sbjct: 298 KMGPAILIYLTYFLALSATKSAIEDGSLPVIIGLWPINAALLLAALMVNTLDSIPVRRFK 357

Query: 361 GLLKRKKVA 369
              K++KVA
Sbjct: 358 DRWKQRKVA 366