Pairwise Alignments

Query, 362 a.a., radical SAM domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 585 a.a., radical SAM protein from Methanococcus maripaludis S2

 Score = 97.1 bits (240), Expect = 1e-24
 Identities = 83/323 (25%), Positives = 134/323 (41%), Gaps = 15/323 (4%)

Query: 24  CDVCPRKCTLREGKRGACFVRMHHQGEIVLTSYGRSSGFCIDPIEKKPLNHFYPGSSVLS 83
           C VC   C + EG  G C +  +   +++              IE  P+ HF P +  L 
Sbjct: 3   CTVCEIGCDISEGNYGRCNMYTNQNSKLIERFPNSYLTVLPITIETMPMVHFAPKNKFLQ 62

Query: 84  FGTAGCNLSCLFCQNWDM-SKSRQMDTLCDSAMPDELAATARRHGCKSIAFTYNDPVVFM 142
             T GCN +C  C +  + S +  +      A P ++ + A+   C+ I F  NDP    
Sbjct: 63  VSTVGCNFNCQGCISETLTSNADALSGALTKASPTDIISRAKTEECRGIVFCLNDPAASY 122

Query: 143 EYAIDAAQAAHELGLKSVAVSAGYICEAPRIEFYRYMDAANIDLKAFSESFYHKICHGQL 202
              ++ A+ A +  L     + GY  E        Y+D  NI LK  S + Y +      
Sbjct: 123 YTFLNLAKEAKKANLWVGCSTNGYFTETALKSLIPYLDFVNIGLKGSSNARYKECGAKSA 182

Query: 203 QPVLETLLYLKHETQVWFEITTLLIPGENDSDEELNAMCQWLVENLGPDVPLHFSAFHPD 262
            PV   +  L HE  V  E + + I   N  DEE+    +  V ++  D+PL    F P 
Sbjct: 183 APVFRNIRIL-HEAGVHVETSAMYI---NAGDEEILKAAE-EVASVSKDIPLQVMRFVP- 236

Query: 263 FKLLDRPPTPLSTLQRARRIA--LNHGLHYVYCGNVHDPDSDATYCASCHKRLIERDWY- 319
               +  P    T+ ++  I   L   L++VY  N    +   T C  C   +I+R++Y 
Sbjct: 237 --FGEAKPELEPTINKSEHIVDQLRSILNHVYLFNSPGTEYLTTKCPICGNEIIKREFYG 294

Query: 320 QLGQYALD--EQGTCRYCGAPLP 340
            +G   ++  ++G C  CG  +P
Sbjct: 295 PMGCRTIESLDEGKCP-CGWQVP 316