Pairwise Alignments

Query, 362 a.a., radical SAM domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 336 a.a., AmmeMemoRadiSam system radical SAM enzyme from Methanococcus maripaludis S2

 Score =  240 bits (612), Expect = 5e-68
 Identities = 124/327 (37%), Positives = 192/327 (58%), Gaps = 7/327 (2%)

Query: 13  YWHALDDGRVCCDVCPRKCTLREGKRGACFVRMHHQGEIVLTSYGRSSGFCIDPIEKKPL 72
           ++  L++ +V C++CP+ C +  G+RG C  R +   ++   +YG+     +DPIEKKPL
Sbjct: 7   FYENLENCKVKCNLCPKHCVISSGRRGICGGRENIDCKLYAVNYGKICATAVDPIEKKPL 66

Query: 73  NHFYPGSSVLSFGTAGCNLSCLFCQNWDMSKSRQMDTLCDSAMPDELAATARRHGCKSIA 132
            ++ PG+SV S  TAGCN  C  CQNW++S+S   D       P+++   A+ + C+ IA
Sbjct: 67  FNYKPGTSVFSIATAGCNFRCKHCQNWEISQSLPEDVPFSELTPEDVVDLAKNYLCEGIA 126

Query: 133 FTYNDPVVFMEYAIDAAQAAHELGLKSVAVSAGYICEAPRIEFYRYMDAANIDLKAFSES 192
           +TY +P +F E+  + A+ A    L +V V+ GYI + P  +    +DA NID+K  SE 
Sbjct: 127 YTYTEPTIFYEFMQETAKIAKNNDLFNVMVTNGYIEKEPLKKL--SIDAMNIDIKGNSE- 183

Query: 193 FYHKICHGQLQPVLETLLYLKHETQVWFEITTLLIPGENDSDEELNAMCQWLVENLGPDV 252
           FY KIC  +L+PVLET +  K +  +  EIT L++P  ND+ +++  +  ++ + LG D 
Sbjct: 184 FYKKICFAELEPVLETCILAK-KLGIHVEITNLIVPTYNDNQKDIEFIINFVKDELGVDT 242

Query: 253 PLHFSAFHPDFKLLDRPPTPLSTLQRARRIALNHGLHYVYCGNVHDPDSDATYCASCHKR 312
           PLHF+AF+P +KL   P T +  +++AR +ALN GL+YVY GNV       TYC  C   
Sbjct: 243 PLHFTAFYPHYKLTSVPSTSIDVIKKARDMALNAGLNYVYAGNVPFSAGYDTYCPDCKSI 302

Query: 313 LIERDWYQLGQYALDEQG---TCRYCG 336
           +++R  YQ  +  LD       C  CG
Sbjct: 303 VVDRFGYQKPKLHLDTSSKTPKCPKCG 329