Pairwise Alignments

Query, 153 a.a., DNA polymerase III chi subunit, HolC (RefSeq) from Shewanella loihica PV-4

Subject, 149 a.a., DNA polymerase III subunit chi from Vibrio cholerae E7946 ATCC 55056

 Score =  107 bits (267), Expect = 8e-29
 Identities = 60/149 (40%), Positives = 80/149 (53%), Gaps = 6/149 (4%)

Query: 1   MPNALFYLMPQASSAATNVAKAEQESVYLFACRLAEQAYRGQQLVYIHCNDQQQAYEVDE 60
           MP A FYL+ + S+ AT    A+   V       A Q  R    +Y+ C D+  A ++ E
Sbjct: 1   MPTATFYLISRDSAQATPEGLAQY--VLYLTRHFAAQGAR----IYLQCQDKPHAEQLAE 54

Query: 61  ILWQFEPSAFVPHNLKGEGPTGGAPVEIGFDKLGPNKNRHLLINLADQAPQFAVNFGQII 120
             WQ EP  F+ HNL GEGP  G  +EIG+  + P+ NR L INLAD    FA  F +++
Sbjct: 55  RFWQIEPEQFLAHNLVGEGPKSGTAIEIGYVGVSPSWNRQLAINLADNQTTFARTFTEVV 114

Query: 121 DFVANDAAMKATARDRYRQYRELGIPLTT 149
           DFV      K  AR+RY+ YR+ G  L T
Sbjct: 115 DFVPCAENAKQLARERYKLYRQAGYQLQT 143