Pairwise Alignments

Query, 959 a.a., valyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

Subject, 1034 a.a., isoleucine--tRNA ligase from Methanococcus maripaludis S2

 Score =  179 bits (455), Expect = 6e-49
 Identities = 189/904 (20%), Positives = 355/904 (39%), Gaps = 188/904 (20%)

Query: 3   KTYNPQSIEQALYQNWEEKGYFKP------HGDESNGNYCIMIPPPNVTGSLHMGHAFQD 56
           K+ N + +++ + + W+++  +K       HG E    Y  +  PP  +G++H+G A+  
Sbjct: 5   KSVNFRELDKKVKEYWKKENTYKKVKALNEHGPE----YYFVDGPPYCSGAIHLGTAWNK 60

Query: 57  TIMDTLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKVEAEEGKS-RHDLGRETFIDRIW 115
            I DT++R++R++G N L + G D  G+  ++ VE +      K     +G + FI++  
Sbjct: 61  IIKDTVLRFKRIQGYNVLDKAGWDMHGLPIEVKVENEFNIGSKKDIETKIGTQEFINKCK 120

Query: 116 DWKNQSGGTITKQLRRLGASVDWDRERFTMDEGMSAAVQEVFVRLYNDDLIYRGKRLVNW 175
           ++     G +  Q   LG  +D++     +             + +  +L+ +  R   W
Sbjct: 121 EFALNHLGHMQGQFENLGVWLDFENAYMPIKRDYMEMGWWTLKKAHEKELLTKDLRSGYW 180

Query: 176 DPKLHTAISDLEV--ENKEKQGSMWHFRYPLADGALTADGKDYLEVATTRPETMLGDSAV 233
            P+  T++++ EV  E KE      + ++ L          +Y+ + TT P T+  +  V
Sbjct: 181 CPRCETSLAEHEVRGEYKEVLDPSVYVKFKLEKS------DEYITIWTTTPWTLPSNMLV 234

Query: 234 AVHPD-DERY--------------------------------------------QSLIGK 248
            V+P+ D  Y                                             SLIG 
Sbjct: 235 CVNPEFDYAYVNVEFENGTAETWIIAEKLVNDVMKKAEKNNDISKFSISKVVKGDSLIGL 294

Query: 249 FILLPIVNRRIP------------IVADDYVDMEFGTGCVKITPAHDFNDYEVGKRHNLP 296
             + P++                 IV  D+V +E GTG V   P    +D+ +GK HN+P
Sbjct: 295 KYIHPLLEENEKQQEFAKIENVHTIVPGDHVTLEGGTGLVHTAPGFGEDDFNIGKEHNIP 354

Query: 297 MFNILTIDAAIRSQAEVVNS--DGTANDELDGSLPERFAGLDRFKARTAIVDEFESLGLL 354
           ++      A I    +  +S   GT   ++D S+ E         ++  +V+     G +
Sbjct: 355 VY------APIDDNGKYTDSIWKGTFVKDMDESVIETLI------SKNLLVNS----GKV 398

Query: 355 GKIDPHALKVPYGDRSGVVIEPLL---TDQWYVAVAPMAKTAIEAVENGDIKFVPQQYEN 411
               PH  +            PLL   T+QW+++++ +  + IE  +   + +VP   + 
Sbjct: 399 KHTYPHCWRCK---------TPLLFRATEQWFLSISKIKDSIIE--QGKTVDWVPDWVKT 447

Query: 412 MYFSWMRDIQDWCISRQLWWGHRIPAWY-DEAGKVYVGRDEAEVRAKHNLDDSVV----- 465
            Y + +  + DW ISRQ +WG  +P W  +E G   V     E++ + N  D  +     
Sbjct: 448 RYVNGVSFVGDWNISRQRYWGIPLPIWICEECGNYEVIGSVDELKERANEKDVDLSDIHK 507

Query: 466 ---------------LRQDPDVLDTWFSSALWTFSTLGWPDDTEALKTFHPTDVLVTGFD 510
                          +++ PDVLD W+ S L  ++++G        K       +  G D
Sbjct: 508 PAVDKITLTCSCGGKMKRTPDVLDVWYDSGLAPYASIG-------SKKLKKAQFITEGND 560

Query: 511 IIFFWVARMIMMTMHFIKDEDGKPQVPFKTVYVTGLIRDEQGNKMSKSKGNVLDPLDMID 570
            +  W      ++     D        ++   + G   DE G KMSKS GN++ P D+  
Sbjct: 561 QVTKWFYSQHALSAVVFDDTS------YEKCMMHGFTLDETGEKMSKSLGNIVSPDDVT- 613

Query: 571 GIDLEALVEKRTGNMMQPQLAAKIEKSTRKEFADGIEAHGTDALRFTLAAMASTGRDINW 630
                                               E +G D LRF L +      D+ +
Sbjct: 614 ------------------------------------EQYGADVLRFYLLSANKAWEDLRF 637

Query: 631 DMKRLDGYRSFCNKIWNASRYVLMNTEEQDCGPQSPNGKADGEMQLSLADRWIVGLFNQT 690
               +D  RS  N +WN+  +        D  P +   K      +   D WI+   N  
Sbjct: 638 SYSEMDETRSMLNTLWNSYAFSANYMVLDDFVPNNEYFK-----HVKDEDAWILSRINTV 692

Query: 691 VKAFDEHMENYRFDLAANTLYEFTWNQFCDWYLELTKP-VLQNGTEAEQRGTRHTLVTVL 749
            K   E +E     +    L +F  N F  WY++L +        + ++     TL  V+
Sbjct: 693 AKEAVEALEKPHLHVYTWALRDFILNDFSRWYIKLIRDRTWMEKNDVQKLSAYQTLYYVI 752

Query: 750 EAMQRLLHPMMPYLTETIWQRVKPLAGVEGDTLMLAEFPVYQASKVDEAAMADLEWVKQV 809
             +  ++ P+ P+L+E I+Q +K     E  ++ + +  + ++  ++E    D E ++++
Sbjct: 753 MKLISIMAPVTPHLSEEIYQNLKTEDMPE--SIFMNKLTI-ESEFINETLEKDTEIIREI 809

Query: 810 IVAV 813
           + ++
Sbjct: 810 VDSI 813