Pairwise Alignments

Query, 959 a.a., valyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

Subject, 886 a.a., valine--tRNA ligase from Methanococcus maripaludis S2

 Score =  325 bits (833), Expect = 8e-93
 Identities = 236/842 (28%), Positives = 384/842 (45%), Gaps = 107/842 (12%)

Query: 10  IEQALYQNWEEKGYFKPHGDESNGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLIRYQRMK 69
           +E+ + + WE++  FK   DE    Y I  PPP  TG +H+GH    T MD + R++RM 
Sbjct: 11  LEKKVQEKWEDEKTFKFLDDEKRPPYIIDTPPPYPTGRMHLGHGLNWTYMDIIARFKRMN 70

Query: 70  GKNTLWQVGTDHAGIATQMLVERKVEAEEGKSRHDLGRETFIDRIWDWKNQSGGTITKQL 129
           G + L+  G D  G+ T++    KVE     ++ D+ R  F     +  +++   +  Q+
Sbjct: 71  GYDVLFPQGWDCHGLPTEV----KVEELNNITKSDIDRHEFRRLCVELTDENVEKMRGQV 126

Query: 130 RRLGASVDWDRERFTMDEGMSAAVQEVFVRLYNDDLIYRGKRLVNWDPKLHTAISDLEVE 189
           R LG S+DWDRE  TM+       Q  F+++Y   LIYRGK  VNW P+  TAI+  EVE
Sbjct: 127 RSLGISIDWDREYITMNPDYVRKSQTAFLKMYEKGLIYRGKHPVNWCPRCETAIAFAEVE 186

Query: 190 NKEKQGSMWHFRYPLADGALTADGKDYLEVATTRPETMLGDSAVAVHPDDERYQSLIGKF 249
            + +   + + ++P A+ +    GK YLE+AT+RPE M     + VHP+DERY  ++GK 
Sbjct: 187 YQGRTSKLNYIKFPYAENS----GK-YLEIATSRPELMAACVGIVVHPEDERYSDVVGKT 241

Query: 250 ILLPIVNRRIPIVADDYVDMEFGTGCVKITPAHDFNDYEVGKRHNLPMFNILTIDAAIRS 309
           + +P+ ++ + +  D  V+ EFGTG V +    D  D     RH L       +  AI  
Sbjct: 242 VKVPLFDQEVNVYPDSDVEKEFGTGVVMVCTFGDKTDVTWVNRHKLE------VKKAINE 295

Query: 310 QAEVVNSDGTANDELDGSLPERFAGLDRFKARTAIVDEFESLGLLGKIDPHALKVPYGDR 369
           + ++    G            ++AG     AR  I+ +  S   + K +P    V    R
Sbjct: 296 KGQLTEICG------------KYAGKKSDDARKEIISDLISENYMIKQEPLEQNVGSCWR 343

Query: 370 SGVVIEPLLTDQWYVAVAPMAKTAIEAVENGDIKFVPQQYENMYFSWMRDIQ-DWCISRQ 428
               IE ++ DQW+V V  +  T +E   N +I +VP+  +     W+ D+  DWCISRQ
Sbjct: 344 CKTPIEIIVGDQWFVNVTKLL-TEVENAAN-EISWVPEHMKARLMKWIEDMGWDWCISRQ 401

Query: 429 LWWGHRIPAWY-DEAGKVYVGRDE---------AEVRAKHNLDDSVVLRQDPDVLDTWFS 478
             +   IP WY  + G++ V + E         +    K    + V    + DVLDTW  
Sbjct: 402 RLFATPIPVWYCKDCGEIIVAKPEDLPIDPTKESPYTCKCGNSNLVA---ETDVLDTWMD 458

Query: 479 SALWTFSTLGWPDDTEALKTFHPTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPF 538
           S++      GW +D E  K  +P  +   G DII  W    ++ ++    ++      P+
Sbjct: 459 SSITPLVIAGWLEDEEFFKKHYPVQLRPQGHDIIRTWAFYTMVRSLAITGEK------PW 512

Query: 539 KTVYVTGLIRDEQGNKMSKSKGNVLDPLDMIDGIDLEALVEKRTGNMMQPQLAAKIEKST 598
             + + G++  E G KMSKS+GNV++P ++                              
Sbjct: 513 DEIVINGMVFGEDGFKMSKSRGNVVEPGEIT----------------------------- 543

Query: 599 RKEFADGIEAHGTDALRFTLAAMASTGRDINWDMKRLDGYRSFCNKIWNASRYVLMNTEE 658
                   + +G DALR   A+ ++ G+D+ +  K ++    F  KIWNA ++  MN  +
Sbjct: 544 --------KTYGADALRLW-ASNSTIGKDVPFAWKEVEYGGRFLRKIWNACKFAKMNISD 594

Query: 659 QDCGPQSPNGKADGEMQLSLADRWIVGLFNQTVKAFDEHMENYRFDLAANTLYEFTWNQF 718
           +             E  + L   WI+   N  +    + + NY+ +     + +F W++F
Sbjct: 595 ETISELKSLNSISIENPVDL---WILSKLNNLISKVSDDLGNYKINTVVE-IQKFLWHEF 650

Query: 719 CDWYLELTKPVLQNGTEAEQRG-----TRHTLVTVLEAMQRLLHPMMPYLTETIWQRVKP 773
           CD Y+E+ K  L N  E+E         ++TL  V+    +LL P  P+  E + +    
Sbjct: 651 CDNYIEMVKHRLYNKEESESAQQEKLMAQYTLYKVITESVKLLTPFTPHFAEIVGEI--- 707

Query: 774 LAGVEGDTLMLAEFPVYQASKVDEAAMADLEWVKQVIVAVRNIRAELNIAPSKPLNAMLR 833
               E D L    +PV     +        E VK  + ++R  ++   +    PLNA L 
Sbjct: 708 ---YEIDDLH-TSWPVSDERLISLENEFVGEVVKNTVASIRRYKSNKGM----PLNAELN 759

Query: 834 SV 835
            V
Sbjct: 760 KV 761