Pairwise Alignments

Query, 572 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

 Score =  246 bits (629), Expect = 1e-69
 Identities = 148/439 (33%), Positives = 245/439 (55%), Gaps = 1/439 (0%)

Query: 135 SDLADDERAEVNRLVSLLDKVTQEGFNPAIQALSQGEYKRSNQLLLEKINPLFKDITDQA 194
           S +  + + +  +L +  +++ +E   P +QA +  +   +  +  +K  P + ++  QA
Sbjct: 110 SQVNPELKEQARKLQARFEQMVREELEPMLQAFANNDMTTAQNIYRDKYAPTYGEMRKQA 169

Query: 195 QAFLDMQIAEAKTSYQASQETVSLYIWLVAIFSGVAMLAISVSSVFIIRRVSLSVVQLEE 254
              LD  + +A+    AS E+         +     ++   ++S+ II  +   V  L++
Sbjct: 170 NQILDTLLQQAEQQNHASVESFEAGRTKQMVIIAAGLIISFITSLVIITNLRSRVAYLKD 229

Query: 255 TAVDIAAG-DLTKRIRLGGHDEFAHIAEHVNRIASDFQQAVTNTHASTSRLASAAEENAV 313
                AA   L  R+ L G+DE   I +  N        ++     ++  LA+ A   + 
Sbjct: 230 RMSSAAANLSLRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVSQ 289

Query: 314 VSTQTQRNVLDQQQQTQLIATAIHEFTATVREVAQSAASAATASQDANGAAHGAQGVVDE 373
            +  TQ N   Q+ +T  +ATAIHE  ATV E+A +AA AA  ++ A   +   + VV E
Sbjct: 290 RAHMTQSNCASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVGE 349

Query: 374 SIAVIEALAQELSRASEAMTLLAQHSNEIGTVVDVIQAISEQTNLLALNAAIEAARAGEQ 433
               I+ L  EL  A++ ++ LA   N I + +D I++ISEQTNLLALNAAIEAARAGEQ
Sbjct: 350 VQNRIQTLVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQ 409

Query: 434 GRGFAVVADEVRSLAKRTQDSTEEIQKMIQRLQQGARDSMQMMQSGTEQVKLSVDKSLMV 493
           GRGFAVVADEVR+LA R+  STEEIQ++I RLQ  +  +++ M+ G  Q  + V+ S   
Sbjct: 410 GRGFAVVADEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKA 469

Query: 494 RDALQQILNSIEEINALNAQIATASEEQSSVTEEININITNISEISDQTAEGARQSSDAT 553
             +L +I + I++IN  N Q+ATA+EEQS+V E+IN N+ +I++++ +T+  A + S A+
Sbjct: 470 NQSLTEINSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRAS 529

Query: 554 EDLARLAESMEADIAHYKV 572
             L RL+  ++  +  +++
Sbjct: 530 ASLQRLSSQLDKLVGSFEL 548