Pairwise Alignments

Query, 572 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 541 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  228 bits (581), Expect = 5e-64
 Identities = 151/442 (34%), Positives = 259/442 (58%), Gaps = 34/442 (7%)

Query: 131 QILASDLADDERAEVNRLVSLLDKVTQEGFNPAIQALSQGEYKRSNQLLLEKINPLFKDI 190
           Q++A D AD ERA     VSL +           QAL    Y+       EK+  L    
Sbjct: 132 QVVALDSADHERA-----VSLAN---------GEQALKAAAYQ-------EKLTALRGHN 170

Query: 191 TDQAQAFLDMQIAEAKTSYQASQETVS-LYIWLVAIFSGVAMLAISVSSVFIIRRVSLSV 249
            ++A       +   K +      +V+ L I L+A F    +LAI+++   I+  +S S+
Sbjct: 171 AEEA-------VVSGKDATAVYDHSVNVLMIVLIAAFLLTVVLAIALTRS-IVDPISASL 222

Query: 250 VQLEETAVDIAAGDLTKRIRLGGHDEFAHIAEHVNRIASDFQQAVTNTHASTSRLASAAE 309
               + A DIAAGDLT+++ + G DE + +   +N ++ + +  +     ++++L++AA 
Sbjct: 223 ----KLAEDIAAGDLTRQLSVSGSDEASRLMTALNTMSGNLRTTIHEISGASAQLSTAAV 278

Query: 310 ENAVVSTQTQRNVLDQQQQTQLIATAIHEFTATVREVAQSAASAATASQDANGAAHGAQG 369
           E   ++    R +  Q  + +  ATA++E +A V EVA++A S + A+Q ++ +A     
Sbjct: 279 EMTSITESADRTLQQQNSEIEQAATAVNEMSAAVEEVARNATSTSQAAQQSSLSADLGNQ 338

Query: 370 VVDESIAVIEALAQELSRASEAMTLLAQHSNEIGTVVDVIQAISEQTNLLALNAAIEAAR 429
            V+E++  ++ L   +  +S  +T LA  + +I  V+ VI+ I+EQTNLLALNAAIEAAR
Sbjct: 339 RVNETLTAMQNLTGLVEGSSAQVTALAGQAQDISKVLGVIRGIAEQTNLLALNAAIEAAR 398

Query: 430 AGEQGRGFAVVADEVRSLAKRTQDSTEEIQKMIQRLQQGARDSMQMMQSGTEQVKLSVDK 489
           AGEQGRGFAVVADEVR+LA RTQ ST+E+++MI  +Q G+  +++ M   T++V ++   
Sbjct: 399 AGEQGRGFAVVADEVRALAHRTQTSTQEVEQMISAIQAGSSATVESMHKSTQEVHVTRKT 458

Query: 490 SLMVRDALQQILNSIEEINALNAQIATASEEQSSVTEEININITNISEISDQTAEGARQS 549
           +    ++L+QI +S+ EIN  N QIA ASE+Q+ V  +++ ++ +I +++ Q++EG RQ+
Sbjct: 459 AEDAGESLRQITDSVLEINNRNLQIAAASEQQAHVARDVDRSLVSIRDLAVQSSEGTRQT 518

Query: 550 SDATEDLARLAESMEADIAHYK 571
             A+ +L++LA ++   +  +K
Sbjct: 519 LIASTELSQLAVNLNDLVLRFK 540