Pairwise Alignments

Query, 572 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 638 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  261 bits (667), Expect = 6e-74
 Identities = 163/447 (36%), Positives = 261/447 (58%), Gaps = 15/447 (3%)

Query: 134 ASDLADDERAEVNRLVSLLDKVTQEGFNPAIQALSQ-----GEYK---RSNQLLLEKINP 185
           A+   DD    +N L   +          AI  L+      G+Y+    +++  L+K+  
Sbjct: 199 ANKAIDDAVTGINTLAGDISSTYSPMLQQAIAGLNGYRAAVGKYRDAQAASKAALDKMTT 258

Query: 186 LFKDITDQAQAFLDMQIAEAKTSYQASQETVSLYIWLVAIFSGVAMLAISVSSVFIIRRV 245
           L   +   +    D+   + K+    S ++V + I   A+   + +LA  V    I R++
Sbjct: 259 LGVSMLATSN---DLITRQNKSRDADSAKSVQMIIAATALAMVLGILAAWV----ITRQI 311

Query: 246 SLSVVQLEETAVDIAAGDLTKRIRLGGHDEFAHIAEHVNRIASDFQQAVTNTHASTSRLA 305
           +  + +  E    +A+GDL++ + +   DE   +   + R+    ++ V       +++A
Sbjct: 312 TTPLQETLEVVERVASGDLSRNLNVDRKDELGKLQATIQRMTVSLRELVGGIRDGVTQIA 371

Query: 306 SAAEENAVVSTQTQRNVLDQQQQTQLIATAIHEFTATVREVAQSAASAATASQDANGAAH 365
           SAAEE + V+ QT   V  Q+ +T  +ATA+HE TATV+EVA++A  A+ A+  A+  A 
Sbjct: 372 SAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMTATVQEVARNAEEASEAAVAADRQAR 431

Query: 366 GAQGVVDESIAVIEALAQELSRASEAMTLLAQHSNEIGTVVDVIQAISEQTNLLALNAAI 425
             + VV+E+IA IE LA  +  +SEAM  L Q S++IG+V+DVI++++EQTNLLALNAAI
Sbjct: 432 DGERVVNEAIAQIERLASAVGNSSEAMGALKQESDKIGSVLDVIKSVAEQTNLLALNAAI 491

Query: 426 EAARAGEQGRGFAVVADEVRSLAKRTQDSTEEIQKMIQRLQQGARDSMQMMQSGTEQVKL 485
           EAARAGE GRGFAVVADEVRSLA+RTQ STEEI+ +I RLQ G + +  +M S  E    
Sbjct: 492 EAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEALIARLQSGTQQATTVMDSSRELSTS 551

Query: 486 SVDKSLMVRDALQQILNSIEEINALNAQIATASEEQSSVTEEININITNISEISDQTAEG 545
           SV+ +     +L  I  ++  I A+N QIA A+EEQS+  EEIN +I N+ ++S+QT+  
Sbjct: 552 SVELTRRAGGSLANITKTVSSIQAMNQQIAAAAEEQSATAEEINRSIINVRDVSEQTSAA 611

Query: 546 ARQSSDATEDLARLAESMEADIAHYKV 572
           + +++ ++ +LARL   ++  ++ + V
Sbjct: 612 SEETAASSVELARLGNHLQVLVSRFTV 638