Pairwise Alignments

Query, 837 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

Subject, 1258 a.a., Serine hydroxymethyltransferase (EC 2.1.2.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  444 bits (1142), Expect = e-128
 Identities = 226/578 (39%), Positives = 356/578 (61%), Gaps = 5/578 (0%)

Query: 253  LETTKVPVVSPDGTLEGVIGISRNITSHKAAQEQLELAANIFENSVEGVVITDASGNIIE 312
            +E   V V    G  EGV+G+ R+I+  + A++ L +AA +FE+S   ++ITD +G I++
Sbjct: 663  IELRLVLVWDEHGAFEGVLGVGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQ 722

Query: 313  VHGAFTEITGYSRDEVLGENPRILNSGRHDKAFFERLWRSLLTNGKWHGEIWNRRKSGAI 372
             + AF+ ++GY+  +VL + P +L      +A    + + L  +  W GE+W +R++G  
Sbjct: 723  ANEAFSRVSGYAVSQVLDQLPNMLTVDEQQEAHLRYVLKQLQQHSTWEGEVWLKRRNGEH 782

Query: 373  YPEQLTISSMYGDDHQVRYFVAVFADISAQKQSEKELARLVYHDPLTKLPNRMMLSANLE 432
            YP  + I+++  D+  +  +V  F+DIS +K SE+ + RL Y+D LT LPNR +    L 
Sbjct: 783  YPAWVGITAVLDDEGDLASYVCFFSDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLH 842

Query: 433  QELRHAAREETELALIFIDVDLFKHINDSYGHVTGDAILVEVARRLGQKLGEEATLARLG 492
              L+ A R++T + L+F+D+D FK INDS GH  GD +L E+A RL   + ++ T+AR+G
Sbjct: 843  TALQSADRQKTWVVLMFLDLDRFKPINDSLGHAAGDRMLKEMATRLLGCVADDDTVARMG 902

Query: 493  SDEFIAVL-PHVESDDSVSLMVS---RLREAFDAPFLLDDEGSVRLTASMGVAIYPGDGE 548
             DEF  +L P    + +++  ++   ++  +   PF+L+      +TAS+G+A+ P DG 
Sbjct: 903  GDEFTLLLQPRASREMALNRAINVAEQILASLVRPFVLEGR-EFFVTASIGIALSPQDGN 961

Query: 549  SGDTLLRNADTAMHRAKANGRNNYAFYTQSLTLASVEHLKLQSALHDAINKDAFYLVYQP 608
                L++NADTAM+ AK  G+NN+ FY   +  +++E L+L+S L  A+ ++ F L YQP
Sbjct: 962  ELSQLMKNADTAMYHAKERGKNNFQFYQADMNASALERLELESDLRHALEQNEFVLYYQP 1021

Query: 609  KLALGTGQCVGFEALLRWEDPQLGTISPAIFIPVAENIGLINEIGLWVLKQAATQGAQWL 668
            + +    +  G EALLRW  P+ G + P  FIPV E +GL+ ++G WV+ +A  Q   W 
Sbjct: 1022 QFSGDGKRLTGAEALLRWRHPRRGLVPPGDFIPVLEELGLVVDVGDWVITEACRQLRTWH 1081

Query: 669  AEGKRFGRISVNVAGPQLQQKQFCAQVKRVLDEAGLPPEYLELEVTESCMMSDPLAVIEV 728
                R  ++SVN++  Q    Q   ++  +L   GLPP  LELE+TES +M +    +++
Sbjct: 1082 QAKVRVPKVSVNISARQFSDGQLGTRIANILRSTGLPPACLELELTESILMREVSEAMQI 1141

Query: 729  LKQLGELGVELSVDDFGTGYSSLNYLKRLPIHKLKIDQSFIRDIPRDGNNTAIAKAVIAL 788
            L  L  LG+ ++VDDFGTGYSSLNYLK+ PI  LKID++F+  +P    +  IA+A+IA+
Sbjct: 1142 LAGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPSGEQDAQIARAIIAM 1201

Query: 789  GHALNLCIIAEGVETPEQAAFLEAAGCDQAQGYLYSKP 826
             H+LNL +IAEGVET EQ  FL   GCD+ QGYL+ +P
Sbjct: 1202 AHSLNLAVIAEGVETHEQLDFLREHGCDEVQGYLFGRP 1239