Pairwise Alignments

Query, 407 a.a., RND family efflux transporter MFP subunit (RefSeq) from Shewanella loihica PV-4

Subject, 405 a.a., RND family efflux transporter MFP subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  586 bits (1510), Expect = e-172
 Identities = 300/404 (74%), Positives = 351/404 (86%), Gaps = 3/404 (0%)

Query: 4   MIKIILRRVFPPFLILIVFGLFAALLMSTQEAPEQKEEEMPVPIVDVMPVRSETVSLNLP 63
           M+K +LRR+ P F IL++F + A  LMST+EAPEQK EEMPVPIVDV  V  +TVSLNLP
Sbjct: 1   MMKTLLRRLSPLF-ILLLFVVGAIALMSTKEAPEQKPEEMPVPIVDVTQVEQQTVSLNLP 59

Query: 64  SYGVVLPKNKTQLVTEVQGRMLTISDKFVAGGIVKRGDMLAQIEPSDYEADLMQAQATLA 123
           SYGVV PK KTQLVTEVQGRML+IS +FVAGGIVK+GD LAQIEPSDYEADLMQA+ATLA
Sbjct: 60  SYGVVTPKYKTQLVTEVQGRMLSISPQFVAGGIVKKGDQLAQIEPSDYEADLMQAEATLA 119

Query: 124 QAKAALDEEIARGEVAKEDWKGYDGGVPPELGLRVPQLKKEQANVKFAEAALARAQRNLE 183
           QA AAL+EEIARGEVAK ++KGYD G+PPELGLR+PQLKKEQANVK+A+AALARAQRNLE
Sbjct: 120 QATAALNEEIARGEVAKIEFKGYDKGLPPELGLRIPQLKKEQANVKYAQAALARAQRNLE 179

Query: 184 RTTIRAPFDGIIKSRNVDLGQYVTLGTNLGELYDTRIAEIRLPLANHELAYLESIDNPDT 243
           RT IRAPFDGIIK+RNVDLGQYVTLGTNLGELYDT IAEIRLP++N +LAYLES+D+PDT
Sbjct: 180 RTVIRAPFDGIIKARNVDLGQYVTLGTNLGELYDTSIAEIRLPISNDDLAYLESVDHPDT 239

Query: 244 QVTLSAELAGRTVNWTGKIVRSEGVIDADNRMVYLVAEVKDPYLRQNKTEGQLPLKYGSF 303
           QVTLSA LAG+   W G I+RSEGVIDADNRMVYLVAE+KDPYLR++KT+G LPLKYGSF
Sbjct: 240 QVTLSASLAGKENTWMGNIIRSEGVIDADNRMVYLVAEIKDPYLREHKTQGSLPLKYGSF 299

Query: 304 VNAIIKGRTVEGIVKLPRYIVRDHQVAVVRDDNTLEMREVNVVRSDIDKVYIKDSLKDGE 363
           VNA+IKGR+V+GIVKLPR++VR+  VA+V + N +EMR VNVVRSD++ V+IKDSLK GE
Sbjct: 300 VNAVIKGRSVDGIVKLPRHVVRNEHVALVNEQNIVEMRHVNVVRSDLENVFIKDSLKTGE 359

Query: 364 RISLTTINNMATGQLVKVIGEEDK--SQSQDKEDESQQTLVAAG 405
           R+++T  +NMA GQLVK+IGE+ K       KED  + +L AAG
Sbjct: 360 RVAITHFSNMANGQLVKIIGEDAKPVQTPTPKEDAPESSLAAAG 403