Pairwise Alignments

Query, 436 a.a., type II and III secretion system protein (RefSeq) from Shewanella loihica PV-4

Subject, 462 a.a., membrane protein from Ralstonia solanacearum IBSBF1503

 Score =  160 bits (405), Expect = 8e-44
 Identities = 115/380 (30%), Positives = 190/380 (50%), Gaps = 30/380 (7%)

Query: 43  VERIVVGNGKVLSAKVVDNKG----VLLIGEAPGNTDLQLWQKDGKLIKLSLTVTPDNSL 98
           +ERI +GN +V  A ++  +G    +L++ + PG   + +W + G  I  ++ V  D   
Sbjct: 52  LERIAIGNPEVADALLLKGRGAAGSLLIVAKKPGAASIMVWTQGGTAITYNVQV--DAEA 109

Query: 99  RTTTMVKKMLAAFPSLTVSESDGLII--VQGEADLAQKEQLEKILEG--DPNVVSLVKYL 154
           R         A  P L V     ++   V+    LA+  +      G   P   S++   
Sbjct: 110 RG--------AGSPDLAVQGGTAVLTGQVRDVYSLARARKAAAAAGGAEPPKGGSMID-- 159

Query: 155 KFAKTMSPMVKMQVKIVEFNKSTLNNVGIKWETSMAG---PAYGVAKGFTANPIFNVASP 211
             A  +   V++ V++VEF+K+ L   G  +  +  G    AY  A    A P + ++S 
Sbjct: 160 NTAMAVPGTVQVDVRVVEFSKTVLKEAGFSFSRTRGGFTFGAYSPASLSQATPSW-LSST 218

Query: 212 GQYTEAITKSITENIGVLDTRGWSSLGIVSGIGSQIQLLSEKGDARLLAQPNLTTRSGES 271
              +  +T   T+ +        SS+    G+ + + L+   G AR+LA+P+L   SG+S
Sbjct: 219 ASSSSGLTVQSTQPVSTAFNLLLSSVS--KGLFADLSLIESNGLARVLAEPSLVALSGQS 276

Query: 272 ASFLAGGEFPIRSVSGLGAVDVEYKEYGIKLDIEPVVDEQQNIVSRVMAEVSSIDPS--V 329
           A+FLAGGE PI     LG   +EYK +GI L + P +  +  I  +V  E S +D S  +
Sbjct: 277 ANFLAGGEIPIPVPQALGTTTIEYKPFGIGLTVSPTILSENRIALKVAPEASDLDFSRGI 336

Query: 330 AVDG--VPGMLTRRTESVINVKNNETIVISGLVNSEMSKIVNKFPLLGDIPILGELFKSR 387
            ++G  VP ++TRR ++ + + + E+ VI GLV+      V+K P LGD+PI+G  FK  
Sbjct: 337 TLNGATVPAIVTRRADTTVELGDGESFVIGGLVSRTTLSNVDKLPFLGDLPIIGSFFKRL 396

Query: 388 DFKDDKTELVIFVTPVVVYP 407
           ++  ++ ELVI VTP +V P
Sbjct: 397 NYNQEERELVIIVTPRLVRP 416