Pairwise Alignments

Query, 436 a.a., type II and III secretion system protein (RefSeq) from Shewanella loihica PV-4

Subject, 373 a.a., type II and III secretion system protein from Marinobacter adhaerens HP15

 Score =  137 bits (344), Expect = 7e-37
 Identities = 93/321 (28%), Positives = 158/321 (49%), Gaps = 16/321 (4%)

Query: 113 SLTVS-ESDGLIIVQGEADLAQKEQLEKILEGDPNVVSLVKYLKFAKTMSPMVKMQVKIV 171
           S+T S E++ L+  +G    A +  L+          ++ + L   +++S  V+  ++IV
Sbjct: 43  SVTASAENEVLVTAEGPGSAAVRVWLQGQTSPQMTEFNVSRLLGGRRSISSQVQTDIRIV 102

Query: 172 EFNKSTLNNVGIKWETSMAGPAYGVAKGFTANPIFNVASPGQYTEAITKSITENIGVLDT 231
           E N+S LN +G+ +     G +  +A        F    P      IT           T
Sbjct: 103 EVNRSELNTLGVYYSKLFNGGSQTIALSPPGAGGFRGFGPSAGATGIT-----------T 151

Query: 232 RGWSSLGIVSGIGSQIQLLSEKGDARLLAQPNLTTRSGESASFLAGGEFPIRSVSGLGAV 291
            G++     S   S I  L   G A  LA+P+L + SG++A+FL+GGEFPI   S  G V
Sbjct: 152 EGFNLFSFGSSSLSIINALESGGFAYTLAEPSLVSLSGQTATFLSGGEFPIPVSSDNGEV 211

Query: 292 DVEYKEYGIKLDIEPVVDEQQNIVSRVMAEVSSIDPSVAVD----GVPGMLTRRTESVIN 347
           ++E+KE+G+ L + P V     I+ +V  EVS +D +  V      VPG+  RRT++ + 
Sbjct: 212 EIEFKEFGVSLALTPTVVSDDEIILKVAPEVSELDFTSGVSTGGVAVPGLRIRRTQTTVT 271

Query: 348 VKNNETIVISGLVNSEMSKIVNKFPLLGDIPILGELFKSRDFKDDKTELVIFVTPVVVYP 407
           +   E+ +ISGLV+   +   ++ P LG++P++G  F+S     +  EL++ VTP  V  
Sbjct: 272 MAPGESFIISGLVSRATTNRSDRIPGLGNLPVIGAFFRSDRVASEDKELIMVVTPKFVSA 331

Query: 408 GQEEHDTQLNRGLEMAEEATK 428
            ++      N G    + +T+
Sbjct: 332 QKQLSREARNFGKAYEQSSTE 352