Pairwise Alignments

Query, 491 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 445 a.a., ATP-dependent RNA helicase PA3950 from Pseudomonas fluorescens FW300-N2E2

 Score =  453 bits (1166), Expect = e-132
 Identities = 226/401 (56%), Positives = 306/401 (76%), Gaps = 1/401 (0%)

Query: 1   MSFTSLGLSAPILKAVADKGYQTPSPIQAQAIPAVLSGKDVMAAAQTGTGKTAGFTLPLL 60
           M+F +LGL  P+L+A+   GYQTP+P+QAQA+PAVL+G+D+MAAAQTGTGKTAGF +PLL
Sbjct: 1   MTFATLGLIEPLLRALETLGYQTPTPVQAQAMPAVLAGRDLMAAAQTGTGKTAGFAVPLL 60

Query: 61  ELLS-QGPRARSKQVRALVLTPTRELAAQIAESVTTYGQHLPLRSAVVFGGVGISPQISQ 119
           +LL+ +GP+  +  VRAL+L PTRELA Q+ ESV  Y Q+LPL +  V+GGV I+PQ+ +
Sbjct: 61  QLLTTEGPKVAANSVRALILVPTRELAEQVHESVRQYAQNLPLSTYAVYGGVSINPQMMK 120

Query: 120 LKRGVDILVATPGRLLDLYQQDAVSFSQLETLVLDEADRMLDMGFIHDIKKILAILPPKR 179
           L++GVD+LVATPGRLLDL++Q+A+ F+QL+TLVLDEADRMLD+GF  ++  I   LP KR
Sbjct: 121 LRKGVDLLVATPGRLLDLFRQNALKFNQLQTLVLDEADRMLDLGFSEELANIYKALPKKR 180

Query: 180 QNLMFSATFSDEIRTLAKGLVNNPVEISVTPRNSTANTVQQLICPVDKNKKSAALVKLIQ 239
           Q L+FSATFSD IR LA  ++N+P+ I V+PRN  ANTV+Q +  VDK +K    V L++
Sbjct: 181 QTLLFSATFSDAIRLLAGQMLNDPLSIEVSPRNVAANTVKQWVVTVDKKRKPELFVHLMR 240

Query: 240 QGDWQQVLVFSRTKHGANRLAKHLEAKGITAAAIHGNKSQGARTKALANFKSGDVRVLVA 299
           +  W+QVLVF++T++G + L + L+  G+ A  IHG+K Q  R +AL  FK+G+V++LVA
Sbjct: 241 KHKWKQVLVFAKTRNGVDALVEKLQGLGVNADGIHGDKPQATRQRALDRFKAGEVQILVA 300

Query: 300 TDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGADGKAVSLVSDEEAKLLADIE 359
           TD+AARGLDI+ LP VVNFDLP V EDY+HRIGRTGRAGA G+A+SLV  +E  LL+ IE
Sbjct: 301 TDVAARGLDIEDLPLVVNFDLPIVAEDYIHRIGRTGRAGATGQAISLVCADEVNLLSAIE 360

Query: 360 RLIGKLLPRAEVEGFEPTHTLPETNLTPKRHGQHKGPRNPK 400
            L  + LPR   + FEP H +P+T+ + +   + K P+ PK
Sbjct: 361 MLTRQTLPRQMEQDFEPEHRVPDTDASGQVIKKPKKPKKPK 401