Pairwise Alignments

Query, 755 a.a., DNA topoisomerase IV subunit A (RefSeq) from Shewanella loihica PV-4

Subject, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

 Score = 1070 bits (2766), Expect = 0.0
 Identities = 520/743 (69%), Positives = 638/743 (85%)

Query: 6   DLSLDGVEQMPLRRFTEEAYLNYSMYVIMDRALPHIGDGLKPVQRRIVYAMSELGLSAQS 65
           ++S DGVEQ+PLR+FTE+AYLNYSMYVIMDRALP+IGDGLKPVQRRI+YAMSELGLSA +
Sbjct: 4   EISFDGVEQLPLRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSASA 63

Query: 66  KHKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAM 125
           K+KKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAM
Sbjct: 64  KYKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAM 123

Query: 126 RYTEARLSKFSEVLLTELGQGTVDWGVNFDGTLKEPMVLPARLPHILLNGITGIAVGMAT 185
           RYTEA+LSKF+E+LL+ELGQGTVDW  NFDGT++EP +LPARLPHILLNG+TGIAVGMAT
Sbjct: 124 RYTEAKLSKFAEILLSELGQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGMAT 183

Query: 186 DVPPHNARELVDACVELIDNPKVDLERLMELVPGPDYPTEAEIISPRTEIAKIYETGRGS 245
           D+PPHN RE+ DA + LIDNP   L  LM+ V GPD+PTEAEII+P  E+ KIY +GRGS
Sbjct: 184 DIPPHNVREVADATIHLIDNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGRGS 243

Query: 246 IKARAVYSVESGEIVITALPHQASGGKILEQIAAQMQAKKLPMVADLRDESDHESPVRIV 305
           IK RAV+  E  +IVITALPHQ SG K+LEQIAAQM+AKKLPMV DLRDESDHE+P RIV
Sbjct: 244 IKMRAVWCKEGSDIVITALPHQVSGAKLLEQIAAQMRAKKLPMVEDLRDESDHENPTRIV 303

Query: 306 IVPRSNRVDCDQLMAHLFATTDLEKNFRVNLNVLGLNGRPQVKGLKQLLTEWLEFRLTTV 365
           IVPRSNRVDCD LM HLFA+TDLEK+FRVNLN++GL+ RPQVKGL Q+L+EW+ FR  TV
Sbjct: 304 IVPRSNRVDCDLLMNHLFASTDLEKSFRVNLNMIGLDNRPQVKGLVQILSEWISFRRETV 363

Query: 366 RRRLEHRLDKVLARLHILEALMIAFLNIDEVIEIIRYHDDPKAELMSRFNLTDEQANAIL 425
           R RL++RLDKVLARLHIL+ L+IA+LN+DEVIEIIR  DDPKA LM+RF+LTD QA+AIL
Sbjct: 364 RSRLQYRLDKVLARLHILQGLLIAYLNLDEVIEIIRNEDDPKAVLMARFDLTDIQADAIL 423

Query: 426 DLKLRHLAKLEEFKIKTEQSELEAEREKLELLLSSDRRMKTLIKKELKQDAETYGDERRS 485
           D KLRHLAKLEE KI+ EQ ELE ER+KLE LL S+RR+  L+KKE+K DA+ +GD+RRS
Sbjct: 424 DTKLRHLAKLEEMKIRGEQDELEKERKKLEELLGSERRLNNLLKKEIKADADKFGDDRRS 483

Query: 486 PLVERSESRALSEQELVPAEAVTVVLSEKGWVRCAKGHDIDPTALSYKAGDGFLCAASGR 545
           PLVER E++AL+E++L+P+EA+TVVLSEKGW+R AKGHD+D  +L+YKAGD +L  A G+
Sbjct: 484 PLVEREEAKALTERDLMPSEAITVVLSEKGWIRHAKGHDVDCQSLNYKAGDNYLTHACGK 543

Query: 546 SNHATVFIGSTGRAFATDTHTLPSARSQGEPVTTRFQLSPGESMAHALLGEDGQCFLLAS 605
           SN   VF+GS GR+++ ++HTLPSAR QGEP+T R  ++ G ++   ++GE+ Q +L+ S
Sbjct: 544 SNQQAVFLGSDGRSYSLESHTLPSARGQGEPITGRLNVAEGTTIRQVVMGEEDQLWLVGS 603

Query: 606 DAGYGFIGDYKDMVSRNKAGKALLSLPANAQVLPPKRVDKSRSESILAITNEGRMLLFSV 665
           DAGYGF+    D++S+N++GKAL++LP N++V+ P+ +    ++ ILAITN+GRMLLF +
Sbjct: 604 DAGYGFVCKGDDLLSKNRSGKALINLPENSEVMTPQVIADLDNDEILAITNQGRMLLFPI 663

Query: 666 DALPQLAKGKGNKIIGIASDRAKSREELLVHLHVVPQDTAVTLWAGKRKLTLKPSDLEHY 725
             LPQL+KGKGNKII I + +AK+REE+L +L V+PQ  ++TL+AGKRKL LK SDL+++
Sbjct: 664 KDLPQLSKGKGNKIINIPAAKAKTREEVLSNLMVLPQGASITLYAGKRKLGLKVSDLDNF 723

Query: 726 RGERGRRGAKLPRGLQRVDKVEL 748
           RGERGRRGA LPRGLQRV  +E+
Sbjct: 724 RGERGRRGALLPRGLQRVTAIEI 746