Pairwise Alignments

Query, 457 a.a., amino acid carrier protein (RefSeq) from Shewanella loihica PV-4

Subject, 453 a.a., sodium:alanine symporter family protein from Methanococcus maripaludis S2

 Score =  422 bits (1086), Expect = e-123
 Identities = 234/460 (50%), Positives = 311/460 (67%), Gaps = 22/460 (4%)

Query: 1   MNFHALLSEINAIVWGPITLCLLVGTGLYLTLRLRLIQVFKLPLALRLLF---KPASGQG 57
           M+F +L++ +N+ VWGP  L LL+GTG++LTLRL  +Q+  LP AL+L F   +  + +G
Sbjct: 1   MDFVSLVNTVNSFVWGPYMLVLLLGTGIFLTLRLGFMQIHTLPYALKLAFSKHQDETSEG 60

Query: 58  DLSSFAALCTALSATIGTGNIVGVATAIKVGGPGALFWMWLAAFFGMATKYGECMLALKY 117
           D+S F AL TAL+ATIGTGNI GVATA  +GGPGA+FWMW+ AFFGMATKY E +LA+KY
Sbjct: 61  DISHFQALMTALAATIGTGNIAGVATAYVLGGPGAIFWMWVTAFFGMATKYAEAVLAIKY 120

Query: 118 RTTDARGNIAGGPMYYIERGL---GLG-WLAKLFALFGVGVAFFGIGTFAQVNAISDAMT 173
           RT D  G +AGGPMY++E+GL   GLG  L   FA FG   A FGIG   Q N+++DA+ 
Sbjct: 121 RTVDDNGEMAGGPMYFLEKGLPDHGLGKILGVAFAFFG-AFAAFGIGNMVQTNSVADAVA 179

Query: 174 IAFHVPAWVTALVLTLLVAAVTLGGVKRIAKVAQKLVPSMALGYVLACLWILVTFSEQII 233
             F V   +T  VL +  AAV LGG+K I K    +VP MA+ Y+LA L IL      II
Sbjct: 180 SNFGVDPLITGFVLAIFTAAVILGGIKSIGKATGIIVPFMAVFYILAGLVILAMNIGYII 239

Query: 234 PALQLVIHSAFSPISAAGGFLGATVAQAIQIGIARGVFSNESGLGSAPIAAAAAKTKEPV 293
           PA   +  SAF   + + GF GA +  AI  G+ RGVFSNE+GLGSAPIAAAAAKT  P 
Sbjct: 240 PAFGTIFSSAF---NFSAGF-GALIGTAIMWGVKRGVFSNEAGLGSAPIAAAAAKTDHPG 295

Query: 294 EQGLVSMTGTFFDTLLICTITGLVLIITGVWS----GDAAGAAMTSAAFATGGSAVIGQY 349
            Q LVSMTGTF DT+++CTITGLVL I G+ +     D  GA++T+A+F       +G  
Sbjct: 296 RQALVSMTGTFLDTIVVCTITGLVLTIAGLKAFPGLTDLTGASLTAASF--DALMPMGGL 353

Query: 350 LVTIALVCFAFTTILGWHYYGERCWYYLTGHKLGERGIKIYQFIFLSLIAVGAFIQLDLI 409
           +VTI LV FA++T+LGW YYGE+C+ YL    +G +GI++Y+  F+ +   GA   L L+
Sbjct: 354 IVTIGLVFFAYSTVLGWSYYGEKCFEYL----IGTKGIRLYRIAFVLVAFWGATASLPLV 409

Query: 410 WLLADTVNGLMAIPNLIALIGLRKVIIADTLSYFAARDSQ 449
           W +ADT+NG MAIPNLI L+ L  V++++T ++   R ++
Sbjct: 410 WNIADTLNGAMAIPNLIGLLLLSGVVVSETKAFNEIRKNE 449