Pairwise Alignments

Query, 530 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 626 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N2E2

 Score =  169 bits (429), Expect = 2e-46
 Identities = 125/386 (32%), Positives = 192/386 (49%), Gaps = 25/386 (6%)

Query: 2   IDKIAKRIASLSALQWSLLTGLPLVPIAYLLIRQGAWGWLALLVIDYLFILSVLLALNSM 61
           IDK AK  A LS  + S L  + +   A  L+       L+LL+        VL+   + 
Sbjct: 259 IDK-AKAYAPLSQFRTSALIAMFVAVAAIALL-------LSLLI-------QVLMRPLTT 303

Query: 62  FGRLRSAAIHLSEGDLRVRLDTQ-----EALGGPLFKAFNQIGEDVSRTVFSLSKSAQQL 116
            GR     I   EGDL  RL  Q       LGG    +FNQ  E +  ++  +S + +Q+
Sbjct: 304 MGRAMQD-IAQGEGDLTRRLVVQGKDEFAVLGG----SFNQFVERIHASISEVSSATRQV 358

Query: 117 VRVADTVQADSQVSKTGALRQKDDVEEAKQIVSKLFETTAEVSSFCESTSQLASESKRQA 176
             ++  V   S  S  G+  Q          +++L   T E++      SQ AS +  QA
Sbjct: 359 HDLSQRVMTSSNASLVGSDEQSARTNSVAAAINQLGAATQEIARNAADASQHASGASEQA 418

Query: 177 DRGKQEMRSLETALEDVGEQFAASDQNFEQLKQESLQIGQVVETIKGIAEQTNLLALNAA 236
           D G+Q +     A+ ++ ++ + S    E L   +  IG +++ IKGI++QTNLLALNAA
Sbjct: 419 DDGRQVVEKTIQAMTELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLALNAA 478

Query: 237 IESARAGELGRGFAVVADEVRSLALRTQVATEDINNKIVNLQTQINDAIAAMQKNRQSVL 296
           IE+ARAGE GRGFAVVADEVR+LA RTQ + E+I+  I +LQ    +A+  M  ++ S  
Sbjct: 479 IEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMNASQTSSE 538

Query: 297 HSQSVANEAESHFEELVSQIDAIDALGQEIAVASQHQVEQTQMLETCLVEVDKVSDENVK 356
            S  VAN+A      +  +I  ID + Q +A A++ Q    + L   +  ++ ++ ++V 
Sbjct: 539 ESVEVANQAGLRLVSVTQRIGEIDGMNQSVAAATEEQTAVVETLNMDVSHINLLNQQSVA 598

Query: 357 ATQETLLASITVRNLAGEIDSLLHRF 382
              ETL     +   A  +  L+  F
Sbjct: 599 NLNETLKDCDALSQQANRLKQLVDSF 624