Pairwise Alignments

Query, 530 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  158 bits (399), Expect = 6e-43
 Identities = 102/315 (32%), Positives = 171/315 (54%), Gaps = 5/315 (1%)

Query: 72  LSEGDLRVRLDTQEALG----GPLFKAFNQIGEDVSRTVFSLSKSAQQLVRVADTVQADS 127
           ++EG+L  RLD ++ +G    G L  A +++  ++   V  +  SA QL    D V A S
Sbjct: 228 IAEGNLAHRLD-RKTIGHDELGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVS 286

Query: 128 QVSKTGALRQKDDVEEAKQIVSKLFETTAEVSSFCESTSQLASESKRQADRGKQEMRSLE 187
           + +  G   Q+++V +    ++++  T AEV+   E  S  + +S + A+ G Q+MR++ 
Sbjct: 287 EQTSQGMQIQQEEVMQIATAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVN 346

Query: 188 TALEDVGEQFAASDQNFEQLKQESLQIGQVVETIKGIAEQTNLLALNAAIESARAGELGR 247
            +++ V ++   ++Q   +L+ ++ QI  VV+ I  IAEQTNLLALNAAIE+ARAGE GR
Sbjct: 347 DSIQHVNQEIGRTEQRVLELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGR 406

Query: 248 GFAVVADEVRSLALRTQVATEDINNKIVNLQTQINDAIAAMQKNRQSVLHSQSVANEAES 307
           GFAVVADEVRSLA +TQ +T DI   I NLQ     A      +R+ + H    + E + 
Sbjct: 407 GFAVVADEVRSLAGKTQQSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQ 466

Query: 308 HFEELVSQIDAIDALGQEIAVASQHQVEQTQMLETCLVEVDKVSDENVKATQETLLASIT 367
             E++  Q   I  +  +IA A   Q   ++ L   +  +++ + +  + +     +   
Sbjct: 467 AIEQIRHQSSQIADMTIQIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAE 526

Query: 368 VRNLAGEIDSLLHRF 382
           +  LA ++   + RF
Sbjct: 527 LSQLASQLQDTVQRF 541