Pairwise Alignments

Query, 530 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  161 bits (407), Expect = 8e-44
 Identities = 101/377 (26%), Positives = 195/377 (51%), Gaps = 6/377 (1%)

Query: 12  LSALQWSLLTGLPLVPIAYLLIRQGAWGWLALLVIDYLFILSVLLALNSMFGRLRSAAIH 71
           + ++ W L+  +P+  +   L        L  L +  +FI   +   NS+   +   A  
Sbjct: 266 IESMDWFLVGTVPVHEVFAELDAVAQRMMLTTLAVAAIFIFMGIFLANSIAMPINQIAKR 325

Query: 72  LSE-----GDLRVRLDTQ-EALGGPLFKAFNQIGEDVSRTVFSLSKSAQQLVRVADTVQA 125
            ++     GDL  R++ +       L K FN   E + +++  +++++++L   A+ V  
Sbjct: 326 FTDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSR 385

Query: 126 DSQVSKTGALRQKDDVEEAKQIVSKLFETTAEVSSFCESTSQLASESKRQADRGKQEMRS 185
            + V+   + +Q+D   +    ++++  T +E++S   + ++ A+++   AD+G+  +  
Sbjct: 386 KALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETANQASGNADQGRNVVNK 445

Query: 186 LETALEDVGEQFAASDQNFEQLKQESLQIGQVVETIKGIAEQTNLLALNAAIESARAGEL 245
            + A+  +      + +  EQL   + +IG +++ I+GI+EQTNLLALNAAIE+ARAG+ 
Sbjct: 446 AKEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQ 505

Query: 246 GRGFAVVADEVRSLALRTQVATEDINNKIVNLQTQINDAIAAMQKNRQSVLHSQSVANEA 305
           GRGFAVVADEVR+LA RT  +TE+I   I  LQ    +A++AM   +       + ++EA
Sbjct: 506 GRGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEA 565

Query: 306 ESHFEELVSQIDAIDALGQEIAVASQHQVEQTQMLETCLVEVDKVSDENVKATQETLLAS 365
                 +  +I  I     ++A A++ Q      +   + E++ +++      +E   AS
Sbjct: 566 VQVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADAS 625

Query: 366 ITVRNLAGEIDSLLHRF 382
            ++R L+G +D L+  F
Sbjct: 626 KSLRELSGRLDKLVGNF 642