Pairwise Alignments

Query, 530 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 629 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  157 bits (398), Expect = 8e-43
 Identities = 104/344 (30%), Positives = 180/344 (52%), Gaps = 4/344 (1%)

Query: 41  LALLVIDYLFILSVLLALNSMFGRLRSAAIHLSEGDLRVRL--DTQEALGGPLFKAFNQI 98
           + L+++    +LSVLL   ++ GR     I   EGDL  RL  ++Q+  G  L   FN  
Sbjct: 286 VVLIILLLGMLLSVLLRPLNLMGRAMHD-IAAGEGDLTKRLVIESQDEFGH-LGNGFNLF 343

Query: 99  GEDVSRTVFSLSKSAQQLVRVADTVQADSQVSKTGALRQKDDVEEAKQIVSKLFETTAEV 158
            E +  ++  ++ S  QL  VA  V   S  S   + +Q          +++L   T E+
Sbjct: 344 VERIHDSMREVASSTVQLNEVALRVLNASNSSMLNSDQQSHRTNSVAAAINELGAATQEI 403

Query: 159 SSFCESTSQLASESKRQADRGKQEMRSLETALEDVGEQFAASDQNFEQLKQESLQIGQVV 218
           +      S  +S+++  A  G+  +     A+  + ++ +++    E L  ++  IGQ++
Sbjct: 404 AQNAARASGHSSDARTLASDGQDVVGQNIEAMSRLSKRISSASGQIETLNTKTANIGQIL 463

Query: 219 ETIKGIAEQTNLLALNAAIESARAGELGRGFAVVADEVRSLALRTQVATEDINNKIVNLQ 278
           + I GI++QTNLLALNAAIE+ARAGE GRGFAVVADEVRSLA RTQ +   +   I  LQ
Sbjct: 464 DVITGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAHRTQESASQVQEMIEQLQ 523

Query: 279 TQINDAIAAMQKNRQSVLHSQSVANEAESHFEELVSQIDAIDALGQEIAVASQHQVEQTQ 338
           +   +A++ M  +++  + +  +AN+A +  E +  +I  ID + Q +A A++ Q    +
Sbjct: 524 SGAREAVSIMNDSQRESVETVGIANKAVASLEHVTERIGEIDGMNQSVAAATEEQTAVVE 583

Query: 339 MLETCLVEVDKVSDENVKATQETLLASITVRNLAGEIDSLLHRF 382
            +   + E++ ++ + V+    TL A   +   +  +  L+  F
Sbjct: 584 AINVDITEINTLNQQGVENLNATLRACTDLEQQSTRLTQLVGSF 627