Pairwise Alignments

Query, 530 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 542 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  152 bits (385), Expect = 2e-41
 Identities = 105/352 (29%), Positives = 181/352 (51%), Gaps = 11/352 (3%)

Query: 40  WLALLVIDYLFILSVLLA------LNSMFGRLRSAAIHLSEGDLRVRLD---TQEALGGP 90
           W+  + I    I ++LLA      L    G   S A  ++  DL   +    T EA    
Sbjct: 191 WMVGIFITVGVITTLLLAWMYTRSLTGPIGDSLSIAQRIATNDLSQDIPQHGTDEA--AK 248

Query: 91  LFKAFNQIGEDVSRTVFSLSKSAQQLVRVADTVQADSQVSKTGALRQKDDVEEAKQIVSK 150
           L  A   +  ++   +  +  S+ QL   ++ + A ++ +    LRQ +++E A   V++
Sbjct: 249 LIAALATMQSNLRNALTLIGDSSTQLAATSEEMHAVTEDASRTILRQTNEIEMAATAVNE 308

Query: 151 LFETTAEVSSFCESTSQLASESKRQADRGKQEMRSLETALEDVGEQFAASDQNFEQLKQE 210
           +     EV+S   S S++ S+S   A  G+ ++    TA+  +  +   +    + L   
Sbjct: 309 MSAAVEEVASNAASASEVTSQSSTAAMAGRAQVDETVTAINLMVSKVQITSTEVQGLAVM 368

Query: 211 SLQIGQVVETIKGIAEQTNLLALNAAIESARAGELGRGFAVVADEVRSLALRTQVATEDI 270
           +  I +V++ I+ IAEQTNLLALNAAIE+ARAGE GRGFAVVADEVR+LA RTQ +T +I
Sbjct: 369 ATDISKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTREI 428

Query: 271 NNKIVNLQTQINDAIAAMQKNRQSVLHSQSVANEAESHFEELVSQIDAIDALGQEIAVAS 330
              + ++QT   +A++AM++       +  +AN A     E+   I  I+     IA A+
Sbjct: 429 EQMVDSIQTGTGNAVSAMEQTSVQAHKTLEMANGAGKALLEITESISQINERNLMIATAA 488

Query: 331 QHQVEQTQMLETCLVEVDKVSDENVKATQETLLASITVRNLAGEIDSLLHRF 382
           + Q +  + ++  LV +  +S +  + + +T +A+  +  LA  ++ L  +F
Sbjct: 489 EEQAQVAREVDRSLVSIRDLSSQTSEGSNQTAIATAELSTLASSLNRLTKQF 540