Pairwise Alignments

Query, 388 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 403 a.a., BamA/TamA family outer membrane protein from Lysobacter sp. OAE881

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 82/375 (21%), Positives = 147/375 (39%), Gaps = 55/375 (14%)

Query: 44  DGEFDESKTI-----DMSYLPTAYYTPEKKFGVGLLMVGLYKTDGAAPEEQPSS-----L 93
           DG+FD S+ +         +P     P   +G GL  +  ++  GAA     +      +
Sbjct: 53  DGKFDMSRWLLERKGGFLPVPIIVSDPAVGYGGGLAALFFHRPAGAATTRTTADGRQQLV 112

Query: 94  VLNSFVSMNNSYGVEVENMTFFNGGKQRLLLGLELHNEASVY-YGRGIADGNIDSNHH-- 150
             N F  M     ++ EN T   GG      G  LH +   + Y  G+A  +++ + +  
Sbjct: 113 PPNLFGGM----AMKTENGTHAYGG------GAMLHFKDDRWRYTAGVAKASVNLDFYTP 162

Query: 151 -EFDEQL---------YSFTPRWMTQVADNYFVGVGVDFTYASADKFTRVEGDIP--LPS 198
             F E L          SF         +N ++G+   +TY   D    V GD     P 
Sbjct: 163 GRFTEPLAIGYNADGLVSFQKIARRLGEENLYLGLS--WTYMDLDLSFDVAGDAQRFTPK 220

Query: 199 DGILPSNFSSGLVVTSIYDSRDYRLNATKGWLFQLDAGLYQNS--EYDSFAKYDLELANY 256
           +    +  +SGL ++  YD+RD       GWL Q++   Y ++     +F  Y      Y
Sbjct: 221 ER---AQTTSGLGLSLQYDTRDNSFTPNSGWLGQIEGNFYDDAFGSDTTFQSYRSHTFAY 277

Query: 257 IDLSTTSWLSQMPGLIAWQVQGHFTSGDVPWNMLPDLGGSSAMRGYIKGRYRDKQMMMGQ 316
           + +    +      ++  ++   + +GD+P+  LP +     +RG    RY D +    +
Sbjct: 278 LPMGGERF------VLGGRIDMRWANGDIPFYRLPFID----LRGVGSARYADTRAATLE 327

Query: 317 VEYRLPIFQRYGMVFWGGVGSVADKVSDLND-ELLTSYGTGFRFKIKDNINL--RLDVGV 373
            E R     R+ ++ + G G    + ++  +     + G G R+KI   + L   LD   
Sbjct: 328 TELRWNTTPRWALIGFLGAGRTWGRHNNFGEAPSQVAKGAGVRYKIASVLGLYTGLDYAW 387

Query: 374 GENETNFYLNVNEVF 388
           G  +   Y+ V   +
Sbjct: 388 GPEDETLYVQVGSAW 402