Pairwise Alignments

Query, 314 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  119 bits (297), Expect = 1e-31
 Identities = 86/294 (29%), Positives = 141/294 (47%), Gaps = 6/294 (2%)

Query: 2   KTEDIALFHRIVETGSLVEAADILNVPKSTLSRRLQTLEDELNVKLFHRQSRAMTLTASG 61
           +   +ALF  +++  S   AA  L V  S +S++L  LE  L VKL  R +R+ TLT +G
Sbjct: 5   RASQMALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDAG 64

Query: 62  SHFYNKTTPLLATLEQTFSELSGKEAAVTGHLRILIFPIPELLYITQAIFEFMDLNPALT 121
           + FY +   LL  +    SE+  +   V G +R+ +      L++  A+ +     P L 
Sbjct: 65  NLFYAQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPELN 124

Query: 122 VEIIVSSEPKDMIRNNIDLAFMLEDAFNENEMVARHIISEFVHFFASPEYLERAGKPTKP 181
           VE+ +     DM++  +DL     +   E  +  R     FV   ASP+YL R G PT+P
Sbjct: 125 VEVHLFDHKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFV-VAASPDYLLRYGSPTEP 183

Query: 182 EELPEHNSILFRYPNGRIFNEVPFGKD---RILSVTGNLCVNSLSTCLEAALMGRGIAMM 238
             L EHN +++R    R +    F +D   + + V GN  V+      +AA+ G GIA +
Sbjct: 184 MALMEHNCLIYRSWE-RDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYL 242

Query: 239 PLPIAREYVENGKLVMLFEDIEPYEGKCF-LVYPSRRFISLASQRFIDHVLRAL 291
              + R+    G+L+ L  +    +   F  VYPSR+ +   +   I+ + + L
Sbjct: 243 ATYLLRDEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQRL 296