Pairwise Alignments

Query, 540 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

Subject, 285 a.a., mechanosensitive ion channel protein MscS from Klebsiella michiganensis M5al

 Score =  175 bits (443), Expect = 2e-48
 Identities = 90/280 (32%), Positives = 154/280 (55%), Gaps = 6/280 (2%)

Query: 256 LNVDVASNLLDQWWNQAKNQALDNGPGLLFKLFVFLLILFLAHLAGKAVQRIVKKMVSNS 315
           LNV  + N    W  + +   L     ++  L + ++ L +A +    V R+++      
Sbjct: 4   LNVVDSINNAGSWLVRNQALLLSYAVNIVAALAIIIVGLIVARIVSNTVNRLMRAR---- 59

Query: 316 KLKFSKLLQDFFVSLSGKTVFALGLMIALSQLGFELGPLLAGFGVAGVIIGFALQDTLSN 375
                  + DF  +L    V A  L+ AL ++G +   ++A  G AG+ +G ALQ +LSN
Sbjct: 60  --HIDATVADFLSALVRYAVIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSN 117

Query: 376 FASGMMILIYRPYDVGDLINAAGVTGKVSQMSLVSTTIKTLDNQRLIIPNNKIWGDTINN 435
            A+G++++++RP+  G+ ++  G+ G V  + + STT+++ D + +++PN KI    I N
Sbjct: 118 LAAGVLLVVFRPFRAGEYVDLGGIAGTVLNVQIFSTTLRSADGKIVVVPNGKIIAGNIIN 177

Query: 436 ITVEHQRRVDMTFGIGYGDNIEKAEQVLRGIVDEHPKVLKQPEPTVKLHLLGESSVDFVV 495
            + E  RR +   G+ Y  +I+K +Q+L  I++   ++LK  E TV+L+ LG SSV++VV
Sbjct: 178 FSREPVRRNEFIIGVAYDADIDKVKQLLTNIIESDERILKDREMTVRLNELGASSVNYVV 237

Query: 496 RPWVKPEDYWDVYWDITRAVKMRFDQEDISIPFPQRDVHI 535
           R W K  D   VYWD+   +K  FD   I  P+PQ DVH+
Sbjct: 238 RVWSKSSDLQSVYWDVLERIKRDFDANGIGFPYPQMDVHV 277