Pairwise Alignments

Query, 323 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella loihica PV-4

Subject, 347 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score = 85.1 bits (209), Expect = 2e-21
 Identities = 80/290 (27%), Positives = 125/290 (43%), Gaps = 12/290 (4%)

Query: 34  LQGQIEAREYNISSKVPGRVAQVMVRRGDQVAEGDLLFAIDSPELNAKLMQAQGGRDAAK 93
           L G ++ R+  +  +V GR+ Q MV  GD V EG +L  +D    +  +  A+ G    +
Sbjct: 41  LYGNVDIRQVQLGFRVSGRIDQAMVDEGDFVTEGTVLARLDVAPYDDAVRAAEAGVGERQ 100

Query: 94  ALQQEADNGARKQQVAASKEQWLKAKAAATLAETTYKRVEALFSEGVLARQKRDEAFTQW 153
           A   +   G R  ++A +K  + +  A  T A   + + + L   G ++R   D A  Q 
Sbjct: 101 ASLDKRVAGPRPAEIAQAKAVYAEHLANLTYARQDFDKADKLLPSGAVSRSLFDHAQAQR 160

Query: 154 QAAKYTQQAAYAMYQMAEEGAREETKAAAEGNARMAEGAVKEVSAILADSQMRSPKSGEV 213
             A     AA    ++ EEG R E  AAA  +   A+  +        D+++++P  G +
Sbjct: 161 GVALARVDAAREALRLLEEGTRAEDIAAARASLLAAQADLSSARTARRDTELKAPADGVI 220

Query: 214 SEVLLHPGELAPSGFPVVSVIDMQDAWAVFQVREDQLKGFKVGDTLEVEIPALG---ERY 270
              +  PG +  SG  V  +      W    V E  L   +V   L VE+   G   + Y
Sbjct: 221 LSRVREPGAIVASGDIVYVMSLKAPVWVRAYVSESNLG--RVYPGLPVEVLTDGAPHKPY 278

Query: 271 PFKVAHISVMGHFATWRSTESGHDFDMRT-FEMELRPVTPIAD--LRVGM 317
              V  IS +  F T ++ E+    D+RT     LR V   AD  LR GM
Sbjct: 279 RGTVGFISPVAEF-TPKTVETP---DLRTDLVYRLRVVIAQADDGLRQGM 324