Pairwise Alignments

Query, 183 a.a., methylation site containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 203 a.a., MSHA pilin protein MshD from Vibrio cholerae E7946 ATCC 55056

 Score = 93.2 bits (230), Expect = 3e-24
 Identities = 57/187 (30%), Positives = 102/187 (54%), Gaps = 25/187 (13%)

Query: 14  GFTLIELVVGMIVLGIALVMLTSMLFPQADRAAETLHRVRSAELAHSLLNEIWGKRYDQN 73
           GFTL+E+++ ++VLG+ALV +T+ L+P++ ++AE +  V++AEL  ++L+E+ G+ +DQ+
Sbjct: 25  GFTLVEMIIVIVVLGVALVGVTTSLYPRSKQSAEQVLSVKAAELGRAVLDEVLGRAFDQH 84

Query: 74  SNPNGGVPAC---GAAARPDLGLPAGLPCTDQANFGPGGLDRNAYRDVDDY--HGLTQAS 128
           S PNGG+P C     A R     P+ L          G  +   + DVDDY        +
Sbjct: 85  SGPNGGLPECVITETAGRTLCSAPSAL------GKDTGESNNTEFNDVDDYITSSPIPVT 138

Query: 129 KMLNSDRTYAQEYINYQLSVSVTY-----------PGSDK-NSKLVAINVTTPSGEVITY 176
            +L +D   + EY  + +S+ V Y           P +++ + K +A+ +  P G    +
Sbjct: 139 DVLGTD--ISSEYQRFSVSIQVFYVSDNGGQFSATPATERTHYKRIALVIYDPQGNAYPF 196

Query: 177 NALRSNY 183
            A++ NY
Sbjct: 197 AAIKGNY 203