Pairwise Alignments

Query, 149 a.a., MSHA pilin protein MshC (RefSeq) from Shewanella loihica PV-4

Subject, 162 a.a., MSHA pilin protein MshC from Vibrio cholerae E7946 ATCC 55056

 Score = 64.7 bits (156), Expect = 6e-16
 Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 12/155 (7%)

Query: 5   QGFTLVELVTSIILIAILSVVVLPRFFTASSYSAYTLRDELISELRRVQLMALNNLDRCY 64
           +GFTL+ELV  IIL+ ILS     RF   SS++  T + E+++ LR  Q  A+     C 
Sbjct: 6   KGFTLIELVVVIILLGILSAYAASRFLGPSSFAVVTTQSEILASLRLTQSRAMQRTGYCN 65

Query: 65  K--------VSVTATSYRADIFGADCNSLTVTGNAQSLPRQTSLSLGGLNSFT-LTFDRD 115
           +        + V+  + +        ++ T      +     +LSL G    + L FD  
Sbjct: 66  RWLLTSNAAIQVSPQAMQGSCLSVFPSNPTDPSWVDAAVSGVALSLAGSGGASFLDFDSL 125

Query: 116 GRVTGSCATGCTIKVAA---DETLDLSIESQGYIH 147
           GR T   + GCT+ +++   +E   + I ++GYI+
Sbjct: 126 GRATQCISAGCTVSISSSTHNEVRQVCINTEGYIY 160