Pairwise Alignments

Query, 731 a.a., primosomal protein N' (RefSeq) from Shewanella loihica PV-4

Subject, 734 a.a., primosome assembly protein PriA from Sinorhizobium meliloti 1021

 Score =  380 bits (977), Expect = e-109
 Identities = 252/738 (34%), Positives = 385/738 (52%), Gaps = 32/738 (4%)

Query: 5   VEVALPVPMRQAFSYRVKEADLDKAQVGVRVRVPFGRQQLIGLVTGLSQSCDLAPNQIKS 64
           V V +P+P  +A+SY V +      + G  V+VP G + ++G+V        + P ++K 
Sbjct: 18  VPVLVPMPAPRAYSYAVPDGMA--VEPGSIVQVPLGPRFVVGVVWDGEDDGGVDPKKLKQ 75

Query: 65  VITFLDHEGVLPPSLYKLTQWAARYYFCSLGQMLSQAL--PVALRKGAEVEAQQLQVWRV 122
           +    D    L P +     W A Y     G ++  AL  P A      VEA +L   R 
Sbjct: 76  IEKVFDCPP-LGPDMRAFLDWVAAYTLTPPGLVVRMALRAPTAFDPEPMVEALRLTEMRP 134

Query: 123 TAAGQEADIDLLKRAPAQRKLLLALLETELSQDE---LNALEQSKTALKALVERGWIECI 179
                       +R  A R+ +LA     LS       +A   S + +  L  +G  E +
Sbjct: 135 ------------ERMTAARERVLATASDGLSWTRSGLAHAAGVSSSVIDGLTSQGVFETV 182

Query: 180 ERRIESNLSWRDGLELDETPHQLNPEQAIAVAMLN--QQQGYHCTLLEGITGSGKTEVYL 237
                  ++  D       P    P++  A  +L   +++ +  +L++GITGSGKTEVY 
Sbjct: 183 FMPPPPVVAAPD--PAFAAPRLEGPQKQAAADLLAAVEERKFSVSLIDGITGSGKTEVYF 240

Query: 238 ALLETVLKQGKQALILVPEIGLTPQTISRFKRRFKVQVAVIHSGLTDNQRLSAWRLARSG 297
             +   L+ GKQ LIL+PEI LT   + RF+ RF  + A  HS L    R   WR   +G
Sbjct: 241 EAIAATLRAGKQVLILLPEIALTASFLERFQDRFGAKPAEWHSDLAPRMREKVWRQVTTG 300

Query: 298 EAAIIIGTRSALFTPMRYPGIIILDEEHDASFKQQEGIGYHARDLAVMRGHLESIPVLLG 357
           +  ++ G RSALF P    G+II+DEEHD ++KQ++ + Y+ARD+AV+RG + + PV+L 
Sbjct: 301 QVRVVAGARSALFLPFEDLGLIIVDEEHDPAYKQEDRVFYNARDMAVVRGRIGNFPVVLV 360

Query: 358 SATPSLETLQNALSGRYQHLSLGSRAGAAEKVRQGIIDIRNQPLKNG--LSHGLLNEMRI 415
           SATPS+E+  N   GRY+ + L +R G A     GI+D+R  P + G  LS  L+N++  
Sbjct: 361 SATPSVESRVNGEVGRYRPIHLPTRFGDAALPDLGIVDMRRHPPERGGFLSPVLVNQIGK 420

Query: 416 HLDAGNQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGEIRCHHCGNQYAIP 475
            +    Q LLFLNRRG+AP  LC  CGH  +C  C ++   H+  G+I+CHHCG     P
Sbjct: 421 TIGRREQALLFLNRRGYAPLTLCRVCGHRFQCPDCSSWLVEHRFRGQIQCHHCGYSERTP 480

Query: 476 RQCHQCGS-TMLMGQGVGTEQLADALAKEFPNYPVVRIDRDTTSRKGALETHLNAIHKGE 534
             C +CG+   L+  G G E++A+ + + FP+   + +  D    K  L   L AI +GE
Sbjct: 481 EACPECGTLDHLVACGPGVERIAEEVERHFPDARTIVLSSDLMGVK-RLRLELEAIARGE 539

Query: 535 YKILVGTQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVSGRAGRARKPG 594
             I++GTQ++AKGH+FP++TLVG++D D  L + D RA ER  QL +QV+GRAGR     
Sbjct: 540 ADIVIGTQLVAKGHNFPNMTLVGIVDADLGLANGDPRAAERTFQLLSQVTGRAGRTGLKS 599

Query: 595 TVLLQTHQCDNPILRELMHKGYGEFARGQLEERKQALLPPAWHMLLLRAEAHKAEDADAF 654
             LLQT+Q  +P+++ ++      F   ++ ER++A+LPP   +  +   A    DA+  
Sbjct: 600 LGLLQTYQPQHPVMQAIVSGDSDAFYEREIHERERAVLPPFGRLASVIVSADTRGDAEGH 659

Query: 655 LAQVAQLLPQDEQCEIIGPMPAPMDRKAGKFRRQLMFQTKTRGLLQQAFEQALPQIEALP 714
              +    P+ +   I+GP  AP+    G+ R +L+   + R    Q+F +A+  I A P
Sbjct: 660 ARGLRNAAPRVDGIAILGPAEAPLALIRGRHRFRLLVHGR-RNSDMQSFVRAM--IAAGP 716

Query: 715 LAK-RCRWSLDRDPQDLL 731
             +      LD DPQ  L
Sbjct: 717 KERGSVSVQLDIDPQSFL 734