Pairwise Alignments

Query, 581 a.a., arginyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

Subject, 620 a.a., arginine--tRNA ligase from Bifidobacterium breve UCC2003

 Score =  131 bits (329), Expect = 9e-35
 Identities = 162/647 (25%), Positives = 276/647 (42%), Gaps = 133/647 (20%)

Query: 16  LKQQAIIPADFEARIQVDRTKDKTHGDFATNLAMMLTKVARKNPREVAQLIIDSLPQNSQ 75
           L  + I P D   ++ V R KD+ +GD+A+N+AM L K A   PR++A+    +L +   
Sbjct: 26  LTDELIPPID---KLAVMRPKDRAYGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADG 82

Query: 76  VAKVEIAGPGFINFFIDE---NALTNQLMAAL----SDDHLGVTLP-------TPQTVVV 121
           +AKVE+AGPGFIN  +D     A+ + ++AA      D HL              QT+ +
Sbjct: 83  IAKVEVAGPGFINITLDSASAAAVVDTVLAAAPAVDGDKHLNKVNEYGRNAHLGGQTLNL 142

Query: 122 DYSSPNLAKEMHVGHLRSTIIGDAVVRALEFQGHKVIRQNHVGDWGTQF----------- 170
           ++ S N    +H+G  R   +GDA+ R LE  G KV+R+ +  D G Q            
Sbjct: 143 EFVSANPTGPIHIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAW 202

Query: 171 ------------------GMLLAYMEELRAQQGEQAQVELADLESFYRAAKVRFDESEEF 212
                             G   AY+ E+ A+   +A+ +  +L +     +   D+ E  
Sbjct: 203 AEANKLGGAGYQTETPCDGYKGAYINEIAARVEAEAKADGVNLTALAHQDQGLNDDGEPL 262

Query: 213 ATRARQLVVEL--QSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVRGESAYND- 269
                ++  E   ++     +++ +   D  ++     +E              S Y D 
Sbjct: 263 GEDDTEVREEFRKRAVPMMFDEIQKSMKDFRVNFDVWFHE-------------NSLYADK 309

Query: 270 DLEQVVRDLDAQGLLSESNGAKVVFQDEFQTKEGEPLPVIIQKADGGFLYATSDLAAMRY 329
            +E  + +L + G + + +GA   F+    TK G+    +I K++G F Y  +D+A    
Sbjct: 310 KVEAAIEELKSHGDIYDKDGA-TWFE---STKHGDDKDRVIIKSNGEFAYFAADIAYYWD 365

Query: 330 RSNVLK--ADRALYFVDLRQALHFQQVFSLARTANFVRPELSLEHMGFGTMN-GEDGRPF 386
           + +  K  AD A+Y +      +  ++ ++   A    P  +++ +     N  +DG+P 
Sbjct: 366 KRHRAKNPADVAIYMLGADHHGYIGRMMAMC-AAFGDEPGKNMQILIGQLANVMKDGKPV 424

Query: 387 K--TRSGGVVKLVDLLSEAETRALELVRSKNPDMDEEELAKIAKVVGIASVKYADLSKNR 444
           +   R+G VV + DL+S                           VVG+ + +Y+ L++  
Sbjct: 425 RMSKRAGNVVTIDDLVS---------------------------VVGVDAARYS-LAR-- 454

Query: 445 ASDYIFSFE---QMLSFEGNTAP--YLLYAYTRVAGIFKRAAE--IDLTGASIK-LEHDK 496
            SDY  +F+    +L+   N  P  Y+ YA+ R   + + AA   I   GA +  L+ + 
Sbjct: 455 -SDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRNAAAAGISYEGADLSLLDTEA 513

Query: 497 EKELGNKLAQFAEVLGRMVAKGQPHALCGYLFELAGAFSSFY---EACPVLAADSE---- 549
           + E+   LAQF  VL       QPH +  YL ELA  +  +Y      P+   D E    
Sbjct: 514 DGEVLAALAQFPSVLATAADDRQPHKVARYLEELAATYHKWYNVERVVPMALTDPETRGD 573

Query: 550 DEKK---------------SRLLLAQLTAKTLKQGLDLLGIETLERM 581
           DE +               +RL L     + +  GLDLLG+   E+M
Sbjct: 574 DEARKALEIAKNPEPARAAARLKLNDAVQQVIANGLDLLGVTAPEKM 620