Pairwise Alignments

Query, 426 a.a., transcriptional regulator, CadC (RefSeq) from Shewanella loihica PV-4

Subject, 427 a.a., transcriptional regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  516 bits (1328), Expect = e-151
 Identities = 253/427 (59%), Positives = 324/427 (75%), Gaps = 1/427 (0%)

Query: 1   MLKITPYLEFDDEAHQLHDRTCGATIGLSFSESAVLAHLLSQPDAICDKEALIAVGWPDR 60
           M KIT YL  D++A QL D   G  IGL+FSE+AVL  LLS P+AI  KE L+ VGWP+R
Sbjct: 1   MHKITSYLMLDEQAKQLVDHVHGTEIGLTFSETAVLVLLLSSPNAIFTKEDLLQVGWPER 60

Query: 61  VVAATSLTQCISTLRKKLEPFPEIQLKTIARRGYQLHVSPKSHVTMLAVSDAGSIKDALI 120
           VVA TSLTQCISTLRKKLEP+ E+QLKT+ARRGYQLHVS +SHV MLA++DA +I+DA++
Sbjct: 61  VVAPTSLTQCISTLRKKLEPYTEVQLKTVARRGYQLHVSEQSHVKMLAINDADAIRDAIV 120

Query: 121 DVSLMVKVSGILILLGIVATLWYQSDYHQVMKHAARWASDHEINLDIGGTTRPVTLINPK 180
            VS+  KV+GI++L  ++  +WY SD+H V+KH A+W +D  I+L+IGGT     ++   
Sbjct: 121 GVSVWTKVAGIIMLGLLLTFVWYWSDHHAVVKHVAKWNADKYISLNIGGTLGTAQVLYID 180

Query: 181 GVDSLHPSMWQKHIAPESNSIQGFNNFGGFAFTDGNHYSMALCDLDERGECRRDKIVNLT 240
             + LHPS WQKH+APE N I G   F  FA TDG +YSMA+C   +  +C    I+N+T
Sbjct: 181 EEEHLHPSWWQKHLAPEGNHINGLPYFSAFASTDGQNYSMAICPALDAKDCTGKGIINIT 240

Query: 241 AIDLTPAGLNMVEFVELSKRMEERIRYNRILIPPGEAG-GDLVEHHYNGDVYFPVADELL 299
           +ID  PAGL+M EF+ LSK+MEERIRYNR+++P  + G G+L+EH+Y+ D+YFPVA ELL
Sbjct: 241 SIDAKPAGLSMAEFIPLSKKMEERIRYNRVVLPVDDKGVGELLEHNYHADIYFPVAGELL 300

Query: 300 VRADIGISLVYEQPLGGKFYSRACITDQDCLTTPIKYQIRGEFEQYRQKLGQLDVDVFHV 359
           VR D+ +SLVY+    GKFYS +CITDQDCLTTPIKY IRGEFEQY+ ++  L+VDVFHV
Sbjct: 301 VRTDLSMSLVYQGQNRGKFYSTSCITDQDCLTTPIKYTIRGEFEQYQTQIDDLNVDVFHV 360

Query: 360 KVRQKDLIMPDVVSASAMHFYREIRKHNIRDEELFYMRVHADNGTAVWVVPLLGSLVAWT 419
           KV QK+L  PD VS SAM FYR IRKH+IRDE+LFY RV+ +  TAVW+VP +G L+AWT
Sbjct: 361 KVAQKELTKPDEVSHSAMQFYRAIRKHDIRDEDLFYYRVYQNKDTAVWIVPQMGQLLAWT 420

Query: 420 KYEKVAL 426
           +Y +V L
Sbjct: 421 QYTQVKL 427