Pairwise Alignments

Query, 506 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella loihica PV-4

Subject, 481 a.a., Na+/H+ antiporter NhaC from Vibrio cholerae E7946 ATCC 55056

 Score =  291 bits (745), Expect = 4e-83
 Identities = 155/449 (34%), Positives = 264/449 (58%), Gaps = 26/449 (5%)

Query: 59  QIALIMAACITLVIGVKNGYSWKEMEAGIVKSVSLATGALLILFSVGSLIGTWILAGTVP 118
           Q+AL +   + + +G++ G+ +K++E   +  +S   GA+LIL +VG+L+GTWI  G VP
Sbjct: 37  QLALYIGWFVIMTLGIRLGHKYKDLENAALNGISNGLGAVLILLAVGALVGTWISGGIVP 96

Query: 119 TMIFYGMKILNPDYFYAASCLLCAVVALSIGSSWTVAGTLGIALIGVAGAMGLSVEITAG 178
           T+I+YG+K ++P  F  A+ ++C++ AL+ G+SW  AGT GIA++G+   +G+   ITAG
Sbjct: 97  TIIYYGLKAIHPSIFLLATMVICSLTALATGTSWGAAGTAGIAMMGIGQGLGIPAPITAG 156

Query: 179 AIISGAYFGDKMSPMSDTTNLAPAVAGSELFGHIRHM-----VWTTTPSILLALIGFLFI 233
           A++SG YFGDKMSP+SD+  LA +++  E+  HI+ M     +      IL  L GF + 
Sbjct: 157 AVLSGCYFGDKMSPLSDSVILASSMSNVEVMEHIKGMLPIALISYVITGILFTLFGFHYA 216

Query: 234 GLNSDSSSVATDLAATMARIETQYHPGLHLLLPLLVVLVLAYKKLPAFPTVILGTLAGAI 293
           G N D S V T +AA    +E Q++   +  +P+L+VL L   ++P+FP +  G+L G +
Sbjct: 217 G-NVDMSQVETVIAA----MEQQFYITPYSFVPVLIVLGLLAMRMPSFPVISFGSLLGIV 271

Query: 294 CAALFQFDGVIKFVNDDSLPTMVALVKGIWVAMFDGYTANTGDKTLDSLLSRGGMSSMVN 353
            A + Q    ++  N    P                Y   +G   +D++L+RGGMSSM+ 
Sbjct: 272 WAVMIQDVDFLQAFNTAWAP----------------YNIESGVSFIDAILNRGGMSSMLG 315

Query: 354 TVWLILCAMAFGGVMEKTGLLQRLLQGVLRLVKSSGSLIITTLASCIGANLITGDQFIAI 413
           +V +I+  + FGG++++ G+L+ + +   R V S GSL  +T+ +    N+     ++++
Sbjct: 316 SVAVIVFGLGFGGLLDRVGVLETIAKLFERRVTSPGSLATSTIGTAFMGNVFGSAMYVSL 375

Query: 414 LLPGRMLKVEYEKHGLAPVNLSRALEDSATITSPLVPWNTCGAYMASTLGVATIAYLPFA 473
           +L  ++    Y++ G    NLSR  E   T+TS +VPW+  G YMAS LGVAT++Y PF 
Sbjct: 376 ILTPKICAKNYDRLGYQRKNLSRNAEFGGTLTSGMVPWSDNGIYMASILGVATLSYAPFM 435

Query: 474 FFNLICPFVSAAYAYYDIKIERLAESEAV 502
           + + +C  V+   +Y    +++   ++A+
Sbjct: 436 WLSFVCILVTIITSYCGWFVDKCEPTQAM 464