Pairwise Alignments

Query, 506 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella loihica PV-4

Subject, 525 a.a., Na+/H+ antiporter NhaC family protein from Methanococcus maripaludis S2

 Score = 64.3 bits (155), Expect = 1e-14
 Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 24/225 (10%)

Query: 28  LLDALIPIIALVCMLTASVYLF----------SSDSSYGANQIALIMAACITLVIGVKNG 77
           +L  ++ I+A++     S  LF          S D+S+G     L+      +   V   
Sbjct: 275 VLPLVVLILAIIFAFMISGGLFAGVGIIESFLSMDASWGLFWGGLVTLLFTVIYFIVSKA 334

Query: 78  YSWKEMEAGIVKSVSLATGALLIL---FSVGSLIGTWILAGTVPTMIFYGMKILNPDYFY 134
              K++     K   L   A+ IL   +S+GS+IG       + ++I   + +       
Sbjct: 335 VPAKDIANLFAKGSKLMLPAITILILAWSLGSVIGDLGTGTYLSSLIQNSLPV---QILP 391

Query: 135 AASCLLCAVVALSIGSSWTVAGTLGIAL-IGVAGAMGLS----VEITAGAIISGAYFGDK 189
           A   LL   +A S G+SW   GT GI L I V  A+GL     V     A++ GA +GD 
Sbjct: 392 AILFLLSGFMAFSTGTSW---GTFGIMLPIAVPMAVGLGMPEFVVPFVAAVLGGAIYGDH 448

Query: 190 MSPMSDTTNLAPAVAGSELFGHIRHMVWTTTPSILLALIGFLFIG 234
            SP+SDTT ++   AG++   H++  +  TT   ++A +G+L +G
Sbjct: 449 SSPISDTTIMSSTGAGTKHIDHVQTQLPYTTLIGIMAFLGYLIVG 493