Pairwise Alignments

Query, 909 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

Subject, 966 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  290 bits (743), Expect = 2e-82
 Identities = 261/957 (27%), Positives = 425/957 (44%), Gaps = 112/957 (11%)

Query: 21  AVPTFAADNSDETVERIEVTGSRIKRIDMEGASPITTITADELAKSGFSTVGDALRSSNL 80
           A  T AA ++ +T++ + VTGSR++R+D E A+P+ T++ +++A +G +TVGD L+    
Sbjct: 42  AQQTPAAGDATQTLDSVVVTGSRLRRVDTETANPVVTVSQEQIAATGKATVGDLLQELPS 101

Query: 81  NAFGSWGGGSNNGWGSQAT-VQLKGASAFHTLTLLDGKRMAKSPVMDGGAANINTIPMAA 139
            A  +    +NNG G+ A+ V L+G     TL L++G R+A +        ++N IP + 
Sbjct: 102 IAGNATNPYTNNGGGTGASAVSLRGLGDKRTLVLVNGIRLAYN--------DVNAIPASM 153

Query: 140 VERIEILTDGASAIYGTDAIAGVVNIILKKDFEGIQFDARMDRPTQEGGDSSNMSFTGGL 199
           +ERIE+L+DGASA+YG+DAI GVVN IL+  F+G+QF +      +  G+  N + T G 
Sbjct: 154 IERIEVLSDGASAVYGSDAIGGVVNFILRTRFDGVQFSSDFGTSKERDGNRRNFALTAGK 213

Query: 200 DSEKGHLVFTVEHYESQKIMQKDRWYTR-PFVKEGGNPEDYQDWVNISPTGRVLTQ--GD 256
             E+G L+  + ++    +    R Y++       G P   +   + +PTG V      D
Sbjct: 214 TFERGSLIAGLSYHNIDPVSAAARDYSKDALALTDGVP--VKQGSSATPTGTVNFNDGSD 271

Query: 257 AGGWVYSTPFSNSDKSCADVYGEAFIGSLIDSDYPGDTLCAYDYTQAAATSVGQTRNNTL 316
           A   +              V G A  G     D   D   +Y+Y         Q R N  
Sbjct: 272 ASSQLRQANGCTRVTLNGGVSGRAGPGDFHCYDAAAD---SYNYQPFNLLQTPQKRTNAF 328

Query: 317 IHYSYELTDSIELTARAYWASNETKDISAPVPA---SISIPEGLPAYTTPEGLELVELVA 373
           +  +Y  +DS+E     +++  E+  I AP+P      +I     +Y  P G   V    
Sbjct: 329 VLGTYRFSDSVEGYVNTWFSKTESASIIAPIPIFSNGDNILVSSQSYYNPFG---VNFGT 385

Query: 374 DPSAGMNY-----RFDTAGDRVAEHHDNIYDFLI--GLDG--SAENFDWDVAVNYNKYDN 424
           D S+G +Y     R    G+R  ++  N Y+F I  GL G     ++ WD   NY K   
Sbjct: 386 DRSSGTSYNDFNTRATVLGNRSYQY--NTYNFQISPGLRGRFGDSSWQWDATFNYGKVKQ 443

Query: 425 YTWGTGYQLKGATTDLVGHWDEDTNSFV----------GWDPRD-------PNSALPPGA 467
            +   G+         +G    D++  V          G  P +        N A   G 
Sbjct: 444 KSINNGFLDYATFNQAIGPSFLDSDGVVKCGSAGAAIAGCTPLNFFNLNDSSNLATLQGM 503

Query: 468 TANYDKRMSASYLDVNGGLSFNLFELPAGDVGMYIGASYREETLDSKVDALAEAGQIVGG 527
             N       +        +  LF++PAG   +  G SYR+E   +  D L   G   G 
Sbjct: 504 VVNPIVTSVYTVKQFEANANGTLFDMPAGAASLAAGLSYRKERSTTTSDPL-WTGDEDGL 562

Query: 528 NG-----GSGGAGERDVKAAYFEVVLPI------IDSLELNLAGRYDDYSDFGGTFNPQV 576
            G      S  +G  DVK AY E + P+      I++L + L  R+ DYS  G   N +V
Sbjct: 563 CGVIEYCASTLSGSFDVKEAYAEALFPLLKDLPGINALNITLGTRFSDYSSVGSKTNSKV 622

Query: 577 SIRYNVIDSLLLRGSWGTGFRAPTLSDLYQGTSEGFGYIKNYLNCYKEGEDIDTCDRWDY 636
           S+ Y  I++LLLRG+    FRAP +++LY G +     + +  N Y  G  +   +    
Sbjct: 623 SLEYRPIENLLLRGTVSQVFRAPNINELYAGVAGDAATVNDPCNGYTGGSSVACANVPTD 682

Query: 637 GATRTGGNEA-------------LKPEESESYNIGVVWEV--TDEINLSVDYWSLETTNL 681
           G+ +    +              LKPE  +SY++G+V++    D ++LS D+W ++  + 
Sbjct: 683 GSYQQSDGQVSGKVSGAAVAGYQLKPETGKSYDVGLVYDPQWIDGLSLSADWWRIDLEDT 742

Query: 682 ISELDASEIVRTQAKLWELADANGEPRPDVSSVYPGTSISQIGNGKIDYVVSQKLNVGLS 741
           I+ + A  ++           AN       S+  P   I + GNG I+Y+    +N+G  
Sbjct: 743 ITTVSAQTVLNQ-------CYAN-----SASAFCP--LIHRNGNGTINYIAEPTVNLGKL 788

Query: 742 EREGIDVKLGAGF-GSDYGDFKFGLGWSYFLKYKSSYSQAGAQILSDDYAGR-----EDT 795
             +GID  L      + +G+   GL  +Y  +Y           ++    GR      + 
Sbjct: 789 WAKGIDFNLTYRLPETAWGNVNVGLNGTYLTRYDVLPDTTDPSSVTIHNVGRYTQAYGNF 848

Query: 796 PAHRINLTADYSFGDHALSYFGNYIGSQKSWDIVEGSWDAEAGETADDGQ---LYEVDSV 852
           P  R   T  ++ GD + ++   Y+G     +   G+ D +   +AD  Q   + ++ + 
Sbjct: 849 PRWRGLGTVSWALGDWSATWRIRYVG-----NTAIGNSDPDQSLSADSSQPTVVRKIGAY 903

Query: 853 FYHNLTYTYTL-PWNNSISLGVTNLTDEDPKFKYDGTY-NGN----LYDIRGRTYWA 903
            Y+NL   Y + PW+    +GV N+ D+ P   Y     N N     YD+ GR YWA
Sbjct: 904 VYNNLQLGYEVQPWHTRFEVGVDNIADKQPPLYYSNNVGNANTDVATYDLLGRFYWA 960