Pairwise Alignments

Query, 909 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

Subject, 945 a.a., TonB-dependent receptor 2 ass w/ COG3533 from Xanthomonas campestris pv. campestris strain 8004

 Score =  234 bits (596), Expect = 2e-65
 Identities = 259/983 (26%), Positives = 407/983 (41%), Gaps = 161/983 (16%)

Query: 17  LAAIAVPTFAADNSDE---------TVERIEVTGSRIKRIDMEGASPITTITADELAKSG 67
           LAA A+P  A     +         T+E++ VTG+ ++R+D E ASP+  I    +  SG
Sbjct: 34  LAAAALPAAAQQQGSDASASPETAQTLEQVNVTGTHLRRVDAETASPVVVIDRQRIEDSG 93

Query: 68  FSTVGDALRSSNLNAFGSWGGGSNNGWG-SQATVQLKGASAFHTLTLLDGKRMA--KSPV 124
            ST+G  L+   + A    G   N+G+   +A V L+      TL L++G RMA   S V
Sbjct: 94  KSTLGQLLQQLPVMAGFMAGPALNSGFSHGRALVSLRNLGPERTLVLVNGHRMAGPASSV 153

Query: 125 MDGGAANINTIPMAAVERIEILTDGASAIYGTDAIAGVVNIILKKDFEGIQFDARMDRPT 184
                 ++N IP A VER+E+LTDGAS++YG+DAI GVVNIILK  ++G        + T
Sbjct: 154 ASAPGVDVNAIPAAMVERVEVLTDGASSVYGSDAIGGVVNIILKDKYDGFAATVDYAQST 213

Query: 185 QEGGDSSNMSFTGGLDSEKGHLVFTVEHYESQKIMQKDRWYTRPFVK---------EGGN 235
               +S  +    G   ++G ++  +       +  +DR Y    V+          G N
Sbjct: 214 HGDANSRTLGVEWGKSWDRGGVIVGLSRNSMNPVFNRDRSYAAKAVEYFEGQVSEVRGAN 273

Query: 236 PEDYQDWVNISPTGRVLT--QGDAGGWVYSTPFSNSDKSCADVYGEAFIGSLIDSDYPGD 293
              +         GR LT  +G A G V    F    ++                    D
Sbjct: 274 TRAFLT------DGRRLTPAEGVAPGPVGQDAFRPYQRAT-------------------D 308

Query: 294 TLCAYDYTQAAATSVGQTRNNTLIHYSYELTDSIELTARAYWASNETKDISAPVPASISI 353
           +   YD  Q   T + +T  N  +H S++ T SI+     +W  ++T   S      + +
Sbjct: 309 SYNVYD-AQYLITPIERT--NASLHGSFDFTPSIQGYMDVFWTRSKTT--SRLDAFGLEM 363

Query: 354 PEGLPAYTTPEGLELVELVADPSAGMNYRFDTAGDRVAEHHDNIYDFLIGLDGSAE--NF 411
                 Y  P G +L+E     S   N R  TA         NI   + GL G  +  ++
Sbjct: 364 LGASDNYYNPFG-DLLERYDLRSTQANTRVYTA----TMFQTNI---VAGLRGRVQGTSW 415

Query: 412 DWDVAVNYNKYDNYTWGTGYQLKGATTDLVGHWDEDTNSFVG----------------WD 455
            WD A  Y +Y +    TG+ +  A  + VG    D++  V                 ++
Sbjct: 416 QWDAAAGYARYKDTLVRTGFSITSALNNAVGASFLDSDGVVKCGAPGAVIAGCTPINIFN 475

Query: 456 PRDPNS-ALPPGATANYDKRMSASYLDVNGGLSFNLFELPAGDVGMYIGASYREETLDSK 514
           P DP + A   G     D    +    V+   + +LF +PAG V   +G  YR       
Sbjct: 476 PNDPATIAALRGTQRPVDLIDESEMRFVDISANGDLFAMPAGAVQAAVGLVYRTNKFAQG 535

Query: 515 VDALAEAGQIVGGNGGSGGA-----GERDVKAAYFEVVLPII------DSLELNLAGRYD 563
             +   A    G    + G       +  V+ AY E+++P++      D+L LNL  RY 
Sbjct: 536 TTSDVAAADADGNCDYNDGCILQQGRDESVREAYAELLVPLLKGAPFADTLNLNLGSRYS 595

Query: 564 DYSDFGGTFNPQVSIRYNVIDSLLLRGSWGTGFRAPTLSDLY--------------QGTS 609
            Y  +G T N +V+I +  + +LL+R +    FRAP L DLY              Q   
Sbjct: 596 KYDAWGATTNSKVAIEWRPVANLLVRATGSQVFRAPALGDLYGSPFTAVIDNTGDFQDPC 655

Query: 610 EGFGYIKNYLNCYKEGEDIDTCDRWDYGATRTGGNE---ALKPEESESYNIGVVWEVTDE 666
           EG+    N   C     D    +   +    +G N     LKPE   SYN+GVV++    
Sbjct: 656 EGYTGAPNPA-CTNVPNDGSFTNTARFNVVTSGANNIGFQLKPERGRSYNLGVVYDPLQN 714

Query: 667 INLSVDYWSLETTNLISELDASEIVRTQAKLWELA-------DANGE-PRPDVSSVYPGT 718
           ++++VD W +   +++S +   ++V    +  E A       DANG+  R  V   Y   
Sbjct: 715 LSVNVDSWRVVLDDMLSGVGDQQVVSDCFEGREAAFCGLIQRDANGQLTRVAVPFAY--- 771

Query: 719 SISQIGNGKIDYVVSQKLNVGLSEREGIDVKLGAGFGSDYGDFKFGLGWSYFLKYKSSYS 778
                 +GK+D               GI  +L     + +GDF  GL  +YF    SS+ 
Sbjct: 772 -----NSGKVDI---------RGYDAGIHYRLA---DTAWGDFSTGLDATYF----SSFR 810

Query: 779 QAGAQILSDDYAGREDT----PAHRINLTADYSFGDHALSYFGNYIGSQKSWDIVEGS-W 833
            AG    + +Y G   +    P  R      +  G    S+   Y+G       V GS +
Sbjct: 811 FAGE---THNYVGENSSWGNMPRWRAVANLAWDKGPWHASWNTRYLG-----PTVNGSQY 862

Query: 834 DAEAGETADDG--QLYEVDSVFYHNLTYTYTL-PWNNSISLGVTNLTDEDPK--FKYDGT 888
           +    +T  DG  + + + SV YH+ + +  +   + +++LGV NL +  P   + Y   
Sbjct: 863 EDFCADTNADGSCRYFRIGSVVYHDASLSRKIAALHGTLALGVDNLGNRKPPRFYSYSNA 922

Query: 889 YN--GNLYDIRGRTYWAGFRQSF 909
            N   + YD  GR +W+  R  F
Sbjct: 923 ANTEASTYDTLGRYFWSRLRVEF 945