Pairwise Alignments

Query, 909 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

Subject, 923 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  258 bits (658), Expect = 2e-72
 Identities = 257/977 (26%), Positives = 419/977 (42%), Gaps = 126/977 (12%)

Query: 2   KLNRLAQYVSLACGGLAAIAVPTFAADNSDETVERIEVTGSRIKRIDMEGASPITTITAD 61
           K N+L   V LA            A +     +++IEVTGSRIK  D+E + P+ T+T  
Sbjct: 4   KSNKLRDAVVLALVVGVGGTGTAIAQEAGTTNLDKIEVTGSRIKSADIETSQPVLTLTRQ 63

Query: 62  ELAKSGFSTVGDALRSSNLNAFGSWGGGSNNGWGSQATVQLKGASAFHTLTLLDGKRMAK 121
           ++ K G ++V D L+    N   +     NNG    + + L+   +  TL L++G+R   
Sbjct: 64  DIDKQGVTSVADVLQRVAANG-AALNRTFNNGGDGSSGIALRNLGSARTLVLVNGRRWTT 122

Query: 122 SPVMDGGAANINTIPMAAVERIEILTDGASAIYGTDAIAGVVNIILKKDFEGIQFDARMD 181
              +DG + ++NTIP A VERI+IL DGAS IYG+DAIAGVVNII +K+F+G +    + 
Sbjct: 123 G--LDG-SVDLNTIPTAMVERIDILKDGASTIYGSDAIAGVVNIITRKNFDGAEAGVNVG 179

Query: 182 RPTQEGGDSSNMSFTGGLDSEKGHLVFTVEHYESQKIMQKDRWYTR---PFVKEGGNPED 238
           + +   G      FT G  +++  L+    + +   +M  DR  +    PF   G +   
Sbjct: 180 QYSDGDGQRQAYDFTLGTTTDRATLMVGASYVKEDSVMAGDREISAGGPPFFS-GQSGTG 238

Query: 239 YQDWVNISPTGRVLTQGDAGGWVYSTPFSNSDKSCADVYGEAFIGSLIDSDYPGDTLCAY 298
           +      + + R+L  G        TP+       A+V+G                   Y
Sbjct: 239 FPGSYVRNGSRRILING------VETPY------VANVHG-------------------Y 267

Query: 299 DYTQAAATSVGQTRNNTLIHYSYELTDSIELTARAYWASNETKDISAPVPASISIPEGLP 358
           +          Q R +     S+  TD++     A +   +++ + A +P +     GL 
Sbjct: 268 NTAPDNYLLTPQERTSLFTQGSFNFTDNVTFRTEAMYNERKSEQLLAAMPVT-----GL- 321

Query: 359 AYTTPEGLELVELVADPSAGMNYRFDTAGDRVAEHHDNIYDFLIGLDGSAE----NFDWD 414
              T     L          +N RF   G R    +   + F  GL+G  E    +FDWD
Sbjct: 322 ---TLSADSLYNPFDQNLTSVNRRFIETGGRSFNQNVKNWHFYGGLEGFFEFADRSFDWD 378

Query: 415 VAVNYNKYD--------------NYTWGTGYQLKGATTDLVGHWDEDTNSFVGWDPRDPN 460
           V   Y+K D              N  +G      G    + G   +     V  +P  P 
Sbjct: 379 VGYRYDKSDENVLTYGLFNLANLNNAYGPSELRNGVPVCVSGPGGDVIPGCVPVNPLGPR 438

Query: 461 SALPPGA------TANYDKRMSASYLDVNGGLSFNLFELPAGDVGMYIGASYREETLDSK 514
            ++   A      TA+    + +     N  +S  LF LPAG +G   G  YR+E+    
Sbjct: 439 GSITQDALDYTSFTAHDSSMVESKGYTAN--ISGELFTLPAGPLGFAAGYEYRKESGQFD 496

Query: 515 VDALAEAGQIVGGNGGSGGAGERDVKAAYFEVVLPIIDSL------ELNLAGRYDDYSDF 568
            DA   AG +  GNG    AG   +   Y E+ +P++  L      + +LA RY DYS+F
Sbjct: 497 PDAFIAAG-LSTGNGARPTAGSYSLDEFYLELSVPVLADLPGAQLLDFSLATRYSDYSNF 555

Query: 569 GGTFNPQVSIRYNVIDSLLLRGSWGTGFRAPTLSDLYQGTSEGF-----------GYIKN 617
           G T N +   R+  I  L++RG++  GFRAP++++L+ G S+ F           G + N
Sbjct: 556 GDTVNNKFGFRWKPIQDLMIRGNYSEGFRAPSINNLFAGNSDSFETYADPCSSQSGQLSN 615

Query: 618 YL---NCYKEGEDIDTCDRW-DYGATRT------GGNEALKPEESESYNIGVVW--EVTD 665
            +   NC   G   +        GA +T        N+ L+PE S S  +G+V+      
Sbjct: 616 PVVAQNCAAAGVPANFVQPGAGNGAKQTLEPFTWTSNDQLQPETSTSRTLGMVFSPSFAQ 675

Query: 666 EINLSVDYWSLETTNLISELDASEIVRTQAKLWELADANGEPRPDVSSVYPGTSISQIGN 725
            +N+S+D+W +E  N I+  ++  I+           + GE     + V    + +  G 
Sbjct: 676 GLNVSLDWWQIEIENAITRPESQFILDKC-----YGGSAGEQAEYCALVTRDPNYAD-GA 729

Query: 726 GKIDYVVSQKLNVGLSEREGIDVKLGAGFGSDYGDFKFGLGWSYFLKYKSSY-SQAGAQI 784
             +  +    LN+   + EG D+ +      +    +F + W     Y SS+ ++A A  
Sbjct: 730 YTVTNINMPLLNLASYKVEGWDLAVNYRL-PETAIGQFTISWD--STYLSSWETKATADS 786

Query: 785 LSDDYAGR--EDTPAHRI--NLTADYSFGDHALSYFGNY-IGSQKSWDIVEGSWDAEAGE 839
             + + GR     P  RI  NL  D+S GD  +++   Y  G  ++  +      A   +
Sbjct: 787 ELEQFQGRYLNQDPYWRIRSNLYVDWSLGDFGINWGLRYKSGMAEACPLSTALAQAYCSD 846

Query: 840 ----TADDGQ-LYEVDSVFYHNLTYTYTLPWNNSISLGVTNLTDEDPKFKYDGTYN--GN 892
               TAD  +    + +  YH++   Y+ PWN ++S+G+ N  D+ P   Y  + N    
Sbjct: 847 PDRVTADGAEPRNHIGATTYHDIQVRYSTPWNATVSVGLNNAFDKGPPVAYSTSANRFDP 906

Query: 893 LYDIRGRTYWAGFRQSF 909
            YD+ GR  +  +RQ F
Sbjct: 907 QYDVPGRYMYMQYRQRF 923