Pairwise Alignments

Query, 909 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

Subject, 962 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  269 bits (687), Expect = 7e-76
 Identities = 266/1001 (26%), Positives = 429/1001 (42%), Gaps = 177/1001 (17%)

Query: 1   MKLNRLAQYVSLACGGLAAIAVPTFAADNSDE------TVERIEVTGSRIKRIDMEGASP 54
           M L   A  + L   G+A    P FAA+  ++      T++RIE+TGSRI+ +D+E A P
Sbjct: 1   MNLRTSAVRLGLLPAGIAIALTPAFAANAQEQSAPSTTTLDRIEITGSRIRSVDVETAQP 60

Query: 55  ITTITADELAKSGFSTVGDALRSSNLNAFGSWGGG----SNNGWGSQATVQLKGASAFHT 110
           + T+T  ++ KSG  +VGD L++ ++    ++       S+   G Q  V L       T
Sbjct: 61  VFTVTQQDIQKSGLVSVGDILQNLSIAGTQTYSKAAVLTSDPEQGGQY-VNLYNLGENRT 119

Query: 111 LTLLDGKRMAKSPVMDGGAANINTIPMAAVERIEILTDGASAIYGTDAIAGVVNIILKKD 170
           L L++GKR   S     G  +++TIP + +ERIE+L DGASAIYG+DA+AGVVNIIL+++
Sbjct: 120 LVLVNGKRWTSSL---SGLTDMSTIPSSLIERIEVLKDGASAIYGSDAVAGVVNIILRQN 176

Query: 171 FEGIQFDARMDRPTQEGGDSSNMSFTGGLDSEKGHLVFTVEHYESQKIMQKDRWYTRPFV 230
           ++G +  A   +  +  G     SFT G  +++  LVF   +     +  KDR  TR   
Sbjct: 177 YDGAEASAYFGQNGRGDGSKEQYSFTAGTTTDRSSLVFGANYTNEDPVWAKDRALTR--- 233

Query: 231 KEGGNPEDYQDWVNIS-PTGRVLTQGDAGGWVYSTPFSNSDKSCADVYGEAFIGSLIDSD 289
                P   +D ++ + P GR               F+++D++    +  +F G  + +D
Sbjct: 234 -YSAGPNHIEDSLSATGPWGR---------------FTSNDQTYILNHTGSFDGRGVGAD 277

Query: 290 ------YPGDTLCAYDYTQAAATSVGQTRNNTLIHY--SYELTDSIELTARAYWASNETK 341
                 Y  +      Y       + Q+  N  I    SY LTDS+   + A ++  ++ 
Sbjct: 278 SRNIANYHNEITTDDYYNSVDQMMLQQSSRNKSIFTTGSYNLTDSLTFKSTAMYSERDSN 337

Query: 342 DISAPVPASISIPEGLP------AYTTPEGLELVELVADPSAGMNYRFDTAGDRVAEHHD 395
              A  P   S     P      +Y  P G ++            +R      R  E + 
Sbjct: 338 RQIAGYPLQASSQPQFPVAISGTSYYNPVGQDI---------NSWFRRTVELPRTTESNV 388

Query: 396 NIYDFLIGLDG----SAENFDWDVAVNYNKYD---------------------------N 424
               F   L+G     +  ++WDV  NYNKYD                            
Sbjct: 389 KTLHFDAALEGVFDVGSHGWNWDVGFNYNKYDVTQVSRGNINLLALQKALGPSFLNAQGQ 448

Query: 425 YTWGTGYQ-LKGATTDLVGHWDEDTNSFVGWDPRDPN-----SALPPGATANYDKRMSAS 478
              GT    L   T++ +G      N   G     PN     +AL      +  K+ +A 
Sbjct: 449 VQCGTAASPLPLGTSNALGQC-TPFNILGGPSASTPNALQYINALGQATQQSLSKQWTA- 506

Query: 479 YLDVNGGLSFNLFELPAGDVGMYIGASYREETLDSKVDALAEAGQIVGGNGGSGGAGERD 538
             ++ GG    LF+LPAG++G+  G  +RE +     D L+ AG            G   
Sbjct: 507 --NITGG----LFDLPAGELGLAAGVEHREISGYDYPDQLSSAGYTT-DLAAQATEGRYQ 559

Query: 539 VKAAYFEVVLPII------DSLELNLAGRYDDYSDFGGTFNPQVSIRYNVIDSLLLRGSW 592
              AY E+++P++        L  ++A RY +YS FG T N + S  +  ID LL+RG++
Sbjct: 560 TNEAYLELLIPVLKDLPGAKELSFDVAARYSNYSRFGDTTNSKFSFTWKPIDDLLVRGTY 619

Query: 593 GTGFRAPTLSDLYQGTSE-----------GFGYIKN---YLNCYKEG--EDIDTCDRWDY 636
           GTGFRAPTLSD + G S+            FG + N      C  EG        D    
Sbjct: 620 GTGFRAPTLSDTFGGGSQTFDTFTDPCDATFGSLGNAGVAARCAGEGLPAGFRQTDTAGN 679

Query: 637 GATRTG-----------GNEALKPEESESYNIGVVWEV--TDEINLSVDYWSLETTNLIS 683
             TR             GN  L+PE S +  +G+V+       ++ S+D++ +  +N+I+
Sbjct: 680 AVTRRDVQGNAPFNSGVGNAELEPEYSITRTVGMVYSPHWVQGLDFSLDWYRISISNIIT 739

Query: 684 ELDASEIVRTQAKLWELADANGEPRPDVSSVYPGTSISQIGNGKIDYVVSQKLNVGLSER 743
            L A++++     L  LA    +   D  +            G++  +    +N+G  E 
Sbjct: 740 SLTANDVL-NNCYLNSLASYCADYGRDAVT------------GQVTTLSRGNVNLGRLET 786

Query: 744 EGIDVKLGAGF---GSDYGDFKFGLGWSYFLKYKSSYSQAGAQILSDDYAGREDTPAHRI 800
           EG +   G  +    + YG F   L  +Y   YKS  ++AGA+    + AG  + P  R 
Sbjct: 787 EGYN--FGVRYRMPETAYGKFAVNLDTNYLATYKSQ-AEAGAEWA--NAAGYWNFPRVRA 841

Query: 801 NLTADYSFGDHALSYFGNYIGSQKSWDIVEGSWDAEAGETADDGQLY------------- 847
            L  D+S G  + ++   Y G  + +      WDA AG   +D                 
Sbjct: 842 TLGLDWSLGALSANWNLRYYGGFRDY-----CWDAAAGIECNDPNYQTPNPGWGGGTGSN 896

Query: 848 EVDSVFYHNLTYTYTLPWNNSISLGVTNLTDEDPKFKYDGT 888
           +  S+ Y +++ T+  PW+ S+++G  N+ ++ P   Y  T
Sbjct: 897 KKGSISYQDVSVTWQAPWDGSVTVGARNIWNKQPPVTYSIT 937