Pairwise Alignments

Query, 909 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

Subject, 899 a.a., outer membrane receptor protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  351 bits (901), Expect = e-100
 Identities = 280/951 (29%), Positives = 451/951 (47%), Gaps = 115/951 (12%)

Query: 4   NRLAQYVSLAC-GGLAAIAVPT---FAADNSDETVERIEVTGSRIKRIDMEGASPITTIT 59
           N LA+ V  A  GG A++A+ +   FA +     VERIEVTGSRIKR D+E A+P+T ++
Sbjct: 5   NTLAKAVRFALIGGAASVAITSAAAFAEEADGAKVERIEVTGSRIKRTDLESATPVTVLS 64

Query: 60  ADELAKSGFSTVGDALRSSNLNAFGSWGGGSNNGWGSQAT-VQLKGASAFHTLTLLDGKR 118
           ++E+AK GF+T+ DAL S   +  G+    S +G+   A+ + L+GA A  TLTL++GKR
Sbjct: 65  SEEMAKQGFTTIQDALESLT-STTGAMTTQSVHGFTPAASSISLRGAGASRTLTLINGKR 123

Query: 119 MAKSPVMDGGAANI---NTIPMAAVERIEILTDGASAIYGTDAIAGVVNIILKKDFEGIQ 175
           + + P   GG  N      +PM AV RIE+L  GASA+YG DA+ GVVNIILK DFEG+ 
Sbjct: 124 LNQYPKPAGGTDNFVDTANLPMEAVARIEVLQSGASAVYGADAVGGVVNIILKDDFEGVA 183

Query: 176 FDARMDRPTQEGGDSSNMSFTGGLDSEKGHLVFTVEHYESQKIMQKDRWYTRPFVKEGGN 235
              R    T+ GG S  ++ + G  S++G++   +E  +++++   DR        +   
Sbjct: 184 LKYRHGDTTEGGGGSDRIALSLGASSDRGNVSTFIEFTDNERLRASDREVFGLHTDK--- 240

Query: 236 PEDYQDWVNISPTGRVLTQGDAGG-WVYSTPFSNSDKSCADVYGEAFIGSLIDSDYPGDT 294
              Y ++   S  G  +  G  G  +V S P    ++  A+ Y   ++            
Sbjct: 241 -VPYSEYSAYSSYGARIAGGPKGNTFVGSIPM---ERCIAEGY--LWVAE--------KN 286

Query: 295 LCAYDYTQAAATSVGQTRNNTLIHYSYELTDSIELTARAYWA-SNETKDISAPVPASISI 353
           LC +D +Q    +   +R  +  +++YEL+D +    R  +A +  T +I          
Sbjct: 287 LCGFDRSQWRDLAPESSRFISSTNFTYELSDDLSFVGRMDYAKAQSTTNIE--------- 337

Query: 354 PEGLPAYTTPEGLELVELVAD----------PSAGMNYRFDTAGD--------------R 389
           P G+  YT     + V L  D           + G+   F  A D              R
Sbjct: 338 PMGIDNYTVTVAGDQVTLGVDLDPSLTKTFNKTTGLGGDFAAAPDGEYYYVRRLHEFSNR 397

Query: 390 VAEHHDNIYDFLIGLDGS-AENFDWDVAVNYNKYDNYTWGTGYQLKGATTDLVGHWDEDT 448
             E +   + F  GL+G  A++++WD +VNY + +   + +GY   G     +   +   
Sbjct: 398 SGETNTQNFFFTAGLEGVIADSYNWDASVNYGRTELDIYSSGYATVGGMFSYLSQGENGV 457

Query: 449 NSFVGWDPRDPNSALPPGATANYD-KRMSASYLDVNGGLSFNLFELPAGDVGMYIGASYR 507
           ++        P +A    + A    +R  ++  +V   +S   FELPAGD     GA Y 
Sbjct: 458 SAL------KPMTAAEVASVAYSPFERAQSTQKNVQANISGTAFELPAGDADFAFGAEYT 511

Query: 508 EETLDSKVDALAEAGQIVGGNGGSGGAGERDVKAAYFEVVLPIIDSLELNLAGRYDDYSD 567
           ++  ++  D+ ++ G I+   GGS GAGER   A Y E+ +P+++ L ++ A RYD YSD
Sbjct: 512 KQDYETDTDSESKKGNILS-RGGSSGAGERSYWATYLEMRMPVLEDLVVDAAVRYDRYSD 570

Query: 568 FGGTFNPQVSIRYNVIDSLLLRGSWGTGFRAPTLSDLYQGTSEGFGYIKNYLNCYKEG-- 625
           FGG   PQV+I Y  +D LL+RG+ G  FRAP +  +Y   ++GF  + ++  C + G  
Sbjct: 571 FGGNLTPQVAIEYRPMDELLVRGTIGKVFRAPDMHRVYGDATKGFATVIDFKKCQELGGS 630

Query: 626 -------EDIDT-CDRWDYGATRTGGNEALKPEESESYNIGVVWEVTDEINLSVDYWSLE 677
                    I+T C+     +T TG N+ LK EE  + NIG VW   + +N S+D W  +
Sbjct: 631 PGKTHPDATINTVCNELHIDST-TGANKDLKAEEGYTANIGAVWG-GESLNASIDVWEWK 688

Query: 678 TTNLISELDASEIVRTQAKLWELADANGEPRPDVSSVYPGTSISQIGNGKIDYVVSQKLN 737
             +++S++ AS+  R                         + I++   G I ++ +   N
Sbjct: 689 LDDMVSDISASKAAREYETY-------------------ASMITRDETGTITHINAVAQN 729

Query: 738 VGLSEREGIDVKLGAGFG-SDYGDFKFGLGWSYFLKYKSSYSQAGAQILSDDYAGREDTP 796
           +   +  GIDV  G G+  +++G+ K     SY LK   S  Q       DD       P
Sbjct: 730 LAYQKVRGIDVTAGYGWDINEFGELKLNFNGSYLLK---SEGQTDPTAAVDDDLDDGGLP 786

Query: 797 AHRINLTADYSFGDHALSYFGNYIGSQKSWDIVEGSWDAEAGETADDGQL-YEVDSVFYH 855
            +R N+   +   D     F   +G+  +  +   S+ +   ++ D  +  YEV S    
Sbjct: 787 QYRANMVLSWFIED-----FETTLGAYHTARMHGSSYKSFKSDSPDFNESDYEVASQTKW 841

Query: 856 NLTYTYTLPWNNSISLGVTNLTDEDPKFKYDGT----YNGNLYDIRGRTYW 902
           NLT  Y +     +  GV NL +  P F    T    Y  ++Y+ RGR ++
Sbjct: 842 NLTAGYNITDGIKVKAGVVNLFNVGPNFDPTDTSWPHYPRSVYNARGREWF 892