Pairwise Alignments

Query, 279 a.a., diaminopimelate epimerase (RefSeq) from Shewanella loihica PV-4

Subject, 278 a.a., diaminopimelate epimerase from Azospirillum brasilense Sp245

 Score =  176 bits (447), Expect = 4e-49
 Identities = 102/274 (37%), Positives = 147/274 (53%), Gaps = 7/274 (2%)

Query: 4   FTKMHGLGNDFMVVDGVTQNVYFSPEQIKRLADRNFGIGFDQLLLVEPPYDPDLDFHYRI 63
           F KMHGLGNDF+V+D        +  +++ +ADR  G+G DQ +++EP          RI
Sbjct: 5   FLKMHGLGNDFVVIDARKTPYSPAEAEVRAIADRKTGVGCDQFIVIEPAKTDGTAGFMRI 64

Query: 64  FNADGSEVEQCGNGARCFARFVKSKGLINKQKIKVSTSSGKMTLRLERDGSVTVNMGIPV 123
            NADG EV  CGN +RC    +  +     +++   T++G +      +G +TV+MG   
Sbjct: 65  RNADGGEVSACGNASRCVGWLLMEEA--GAERVAFETNAGILQASRADNGRITVDMGPAN 122

Query: 124 LEPSRIPFNAKKAEKTYLLQADMPEGMQTFLCGAVSMGNPHCVLEVDDVANADVERIGSL 183
           L+ ++IP     AE    L+ D           AVSMGNPH V  VDD     +  +G +
Sbjct: 123 LDWTQIPL----AEPADTLRLDAVSHGGFAGPTAVSMGNPHAVFFVDDAEAVPLAEVGPV 178

Query: 184 LTKHERFPKGVNVGFMQVVDANHIKLRVYERGAAETLACGSGACAAVAVGQLQGKLARRV 243
              H  FP+  NV F+QV+    +++RV+ERGA  T ACG+GACA       +G   R+V
Sbjct: 179 FENHPAFPQRTNVEFVQVLSPTAVRMRVWERGAGVTQACGTGACATAVAAIRRGLTNRKV 238

Query: 244 RVDLPGGSLTINWEGEGKPLWMTGPAEHVYDGQI 277
            V L GG+LTI W  +G+ L MTGP    Y G++
Sbjct: 239 DVILDGGTLTIEWREDGRVL-MTGPVALSYTGRL 271