Pairwise Alignments

Query, 616 a.a., dihydroxy-acid dehydratase (RefSeq) from Shewanella loihica PV-4

Subject, 550 a.a., dihydroxy-acid dehydratase from Methanococcus maripaludis S2

 Score =  421 bits (1081), Expect = e-122
 Identities = 247/594 (41%), Positives = 344/594 (57%), Gaps = 65/594 (10%)

Query: 19  RALWRATGVKDSDFGKPIVAIANSFTQFVPGHVHLKDMGSLVAGAIEEAGGIAKEFNTIA 78
           RAL +A G  D D  KP + I NSFT+ VPGH+HL+ +       +   GG   EFNTI 
Sbjct: 16  RALLKACGYTDEDMEKPFIGIVNSFTEVVPGHIHLRTLSEAAKHGVYANGGTPFEFNTIG 75

Query: 79  VDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADALVCISNCDKITPGMLMAALRLNI 138
           + DGIAMGH GM YSLPSRE+IAD+VE M  AH  D LV I  CDKI PGM+M ALRLNI
Sbjct: 76  ICDGIAMGHEGMKYSLPSREIIADAVESMARAHGFDGLVLIPTCDKIVPGMIMGALRLNI 135

Query: 139 PVVFVSGGPMEAGKTKLSDKLIKLDLVDAMVAAADDRVSDEDSEKIERSACPTCGSCSGM 198
           P + V+GGPM  G+ +   K   + L + +      ++++E+ + IE  AC   GSC+G+
Sbjct: 136 PFIVVTGGPMLPGEFQ-GKKYELISLFEGVGEYQVGKITEEELKCIEDCACSGAGSCAGL 194

Query: 199 FTANSMNCLTEALGLSLPGNGSLLATHSDRRELFLEAGRRVMALANRYYRDDDESALPRN 258
           +TANSM CLTEALGLSLP   +  A  + +  L  ++G +++ +         E   P +
Sbjct: 195 YTANSMACLTEALGLSLPMCATTHAVDAQKVRLAKKSGSKIVDMVK-------EDLKPTD 247

Query: 259 IASFKAFENAMALDIAMGGSSNTVLHLLAAAQEAKVDF-TMADIDRLSRQVPHLCKVAPS 317
           I + +AFENA+ +D+A+GGS+NT LH+ A A E +  F T+ D DRLS +VPH+  + P 
Sbjct: 248 ILTKEAFENAILVDLALGGSTNTTLHIPAIANEIENKFITLDDFDRLSDEVPHIASIKPG 307

Query: 318 TPKYHMEDVHRAGGVMGILGELDRAGLLHTDVSHVAGENLKAVLVQYDLVQTQDEAVQQF 377
             +++M D+H AGG+  +L  L        D   V G ++  +                 
Sbjct: 308 -GEHYMIDLHNAGGIPAVLNVLKEK---IRDTKTVDGRSILEI----------------- 346

Query: 378 YAAGPAGIPTTKAFSQSCRWPSLDVDRQEGCIRTREFAFSQEGGLAVLSGNIAADGCIVK 437
                         ++S ++ + DV      IR  E    +  GL VL GN+A +GC+VK
Sbjct: 347 --------------AESVKYINYDV------IRKVEAPVHETAGLRVLKGNLAPNGCVVK 386

Query: 438 TAGVDEANHTFVGHARVYESQDDAVAGILGGEVVAGDVVVIRYEGPKGGPGMQEMLYPTS 497
              V    +   G A+VY S+D+A++ ILGG++V GDV+VIRYEGP GGPGM+EML PTS
Sbjct: 387 IGAVHPKMYKHDGPAKVYNSEDEAISAILGGKIVEGDVIVIRYEGPSGGPGMREMLSPTS 446

Query: 498 YLKSKGLGTSCALITDGRFSGGTSGLSIGHVSPEAAAGGTIALVETGDRIEIDIPARSIT 557
            +   GL  S ALITDGRFSGG+ G  IGHVSPEAAAGG IA +E GD I+ID+  + I 
Sbjct: 447 AICGMGLDDSVALITDGRFSGGSRGPCIGHVSPEAAAGGVIAAIENGDIIKIDMIEKEIN 506

Query: 558 LAVSDEVLETRRQAM---QARGKQAWKPVNRERSVSLALKAYAMLATSADKGAV 608
           + + + V++ R   +   + + K+ +            L  Y+ L +SAD+GAV
Sbjct: 507 VDLDESVIKERLSKLGEFEPKIKKGY------------LSRYSKLVSSADEGAV 548