Pairwise Alignments

Query, 484 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 484 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  777 bits (2006), Expect = 0.0
 Identities = 375/484 (77%), Positives = 416/484 (85%)

Query: 1   MKFKQDYFDQLSGFYSQVTPQGLPRPQWLAWSEDAAALIGLKQPDDELLQGLAGNQAIPG 60
           MKFKQD+F QL  FYSQV PQG+  P WLAWS+DAAALIGL QP DELLQGL+GN A+ G
Sbjct: 1   MKFKQDFFTQLPEFYSQVYPQGISNPHWLAWSDDAAALIGLHQPTDELLQGLSGNAAVEG 60

Query: 61  ASYYAQVYSGHQFGGYSPQLGDGRSIILGEAEGPQGYWDVALKGAGMTPYSRHGDGRAVM 120
           ASYYAQVYSGHQFGGY+P+LGDGRSIILGEA GP G WDVALKG G TPYSRHGDGRAVM
Sbjct: 61  ASYYAQVYSGHQFGGYTPRLGDGRSIILGEAIGPNGAWDVALKGGGPTPYSRHGDGRAVM 120

Query: 121 RSAVREFLVSEALHHLNIPTTRALAVIGSDLPVWRETQETAAITVRLAKSHIRFGHFEFF 180
           RSAVREFLVSEALHHL +PTTRALAVIGSD+PVWRE+QETAAITVRLA+SHIRFGHFEFF
Sbjct: 121 RSAVREFLVSEALHHLGVPTTRALAVIGSDMPVWRESQETAAITVRLARSHIRFGHFEFF 180

Query: 181 CHSEQGSKDKLKQLLDFTLSQHYPELSRDQAGYIAWFNRVVADTAKLIAHWQAVGFAHGV 240
            HSE+G  DKL QLL+FTL QHYP LS D AGY AWF +VV D+AK+IAHWQA+GFAHGV
Sbjct: 181 SHSERGQADKLTQLLNFTLKQHYPHLSCDPAGYKAWFLQVVQDSAKMIAHWQAIGFAHGV 240

Query: 241 MNTDNMSILGDSFDFGPFAFLDTFEEDFICNHSDPNGRYAFGQQPGVGLWNLQRLAQALV 300
           MNTDNMSILGDSFDFGPFAFLDTF+EDFICNHSDP+GRYAFGQQPG+GLWNLQRLAQAL 
Sbjct: 241 MNTDNMSILGDSFDFGPFAFLDTFQEDFICNHSDPDGRYAFGQQPGIGLWNLQRLAQALT 300

Query: 301 PIIASDDLIAALNTYQHHLVQAYLVLMRDKLGIKLVEPAGSERDEADLQLIGGFTLLMEA 360
           P+IASDDLIAALN YQH LVQ YL LMR KLG+     + +E+D+ DL+LIG FT+LME 
Sbjct: 301 PVIASDDLIAALNQYQHALVQHYLALMRAKLGLVQQADSSAEQDQQDLELIGRFTVLMEK 360

Query: 361 NRLDHTNTWRRFAQLDPNSQHSSLRDDFIDLAGFDTWYQAYQERLGQVSDVAGWQAVRAQ 420
           N+LD+++TWRRF QLDP+S HSSLRDDFIDL  FD WYQ YQ RLG+V+DV  WQ    +
Sbjct: 361 NQLDYSHTWRRFGQLDPSSLHSSLRDDFIDLNEFDAWYQVYQARLGKVTDVEAWQQQCNR 420

Query: 421 VNPKYVLRNYLAQEAIIACEEGNTQPLAELHQLLTRPFDEQPEKEAYAKRPPEWGQGLIM 480
           VNPKY+LRNYLAQEAIIA +EGN   L  LHQ+L +PF EQ E E  AKRPP+WGQGLIM
Sbjct: 421 VNPKYILRNYLAQEAIIAVDEGNLAQLQRLHQVLRQPFTEQIEHEELAKRPPDWGQGLIM 480

Query: 481 SCSS 484
           SCSS
Sbjct: 481 SCSS 484