Pairwise Alignments

Query, 181 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 251 a.a., ferredoxin from Burkholderia phytofirmans PsJN

 Score =  102 bits (253), Expect = 7e-27
 Identities = 53/158 (33%), Positives = 77/158 (48%), Gaps = 22/158 (13%)

Query: 16  CVGCGACTVACQIHNEL---------------PENHRFRKVDRYEVKRDDGAIDVWLSHS 60
           CVGC AC  +C+  N                 P    F +V  +E      A  +    S
Sbjct: 13  CVGCHACVTSCKEWNTSGESGSLADLNPYDADPSGTFFNRVQSFEAGSFPNAETIHFPKS 72

Query: 61  CMHCENPACLMVCPAKA-YHVRDDGIVVLDREKCTGCGLCASACPYAAVSIREDDGKADK 119
           C+HCE+P C+ VCP  A Y  ++DG+V++D ++C GC  CA ACPY A  + E   +  K
Sbjct: 73  CLHCEDPPCVPVCPTGASYKRKEDGLVLVDFDRCIGCKYCAWACPYGARELDESRKEMTK 132

Query: 120 CNMCVE------LLDRGMKPACVSGCPVECLDVGNLQE 151
           C +CV+      L +R  +PACV  CP      G++ +
Sbjct: 133 CTLCVDRIHDENLSERDRQPACVLACPTSARLFGDIHD 170



 Score = 27.7 bits (60), Expect = 2e-04
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 19/71 (26%)

Query: 14  ENCVGCGACTVACQIHNELPENHRFRKVDRYEVKRDDGAIDVWLSHSCMHCEN------- 66
           + C+GC  C  AC      P   R     R E+ +    +D       +H EN       
Sbjct: 104 DRCIGCKYCAWAC------PYGARELDESRKEMTKCTLCVD------RIHDENLSERDRQ 151

Query: 67  PACLMVCPAKA 77
           PAC++ CP  A
Sbjct: 152 PACVLACPTSA 162



 Score = 23.9 bits (50), Expect = 0.002
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 86  VVLDREKCTGCGLCASAC 103
           +V+D   C GC  C ++C
Sbjct: 6   LVIDLNVCVGCHACVTSC 23