Pairwise Alignments

Query, 362 a.a., porin (RefSeq) from Shewanella loihica PV-4

Subject, 314 a.a., porin (RefSeq) from Shewanella sp. ANA-3

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 73/320 (22%), Positives = 122/320 (38%), Gaps = 27/320 (8%)

Query: 45  LEAQAAPSQFKNSEVSLYGSIRPTLSYLDDSTDETWDVRDALSRVGIKASTEFADGWRAI 104
           L +    S +    +++YG +  T    D+  D T  ++   SR G+K   E +    A 
Sbjct: 14  LASATLASAYAAEPLTVYGKLNVTAQSNDEKGDSTTTIQSNASRFGVKGDFELSSSLEAF 73

Query: 105 AQGEWSVD--IANSGNFGKARQAYVAIASPYGQVGIGKQRPAQYSLIAEYVDIFNHGNSP 162
              E+ VD   A S NF KAR  +V +   +G   +G+       +    VD FN  +  
Sbjct: 74  YTVEYEVDTGAATSDNF-KARNQFVGLKGAFGSFSVGR-NDTLLKISQGNVDQFNDLSGD 131

Query: 163 YAYDHESPFFVDNFVTYKLVT-GGFTWMAGAQFDGDKGDTGADFVNIGVGYDVGALHLGL 221
                +    +    TY   + GGF + A    +GD      D  ++   Y    L    
Sbjct: 132 LKSLFKGENRLGQTATYLSPSIGGFVFGATYAAEGDADQQAQDGFSLAAMYGDAKLKKSP 191

Query: 222 GY--VTQDSLENGQVNGDNQTLGGVVAYTFDNGLYLAASYQDKQYNFDNQVQHGDRSGST 279
            Y  +  DS     V G       V     D  L L   YQ ++  + N +         
Sbjct: 192 FYAAIAYDS----DVKGYEILRASVQGKIAD--LTLGGMYQQQEQTYKNSLP------VN 239

Query: 280 LDTALAYPLSNEYKIKLGYF--QFKDGIEDISSMDYDGFNTTLEWNPLANVRVHLEYLDK 337
            D+   Y LS  Y I       Q++D +ED+     D ++   +++     +V   Y ++
Sbjct: 240 TDSVNGYLLSAAYDINAVTLKAQYQD-MEDLG----DSWSVGADYSLGKPTKVFAFYTNR 294

Query: 338 NYDNLN-DDRAVTVGFRYDF 356
           + +  N DD+ + VG  + F
Sbjct: 295 SMEASNDDDKYIGVGLEHKF 314