Pairwise Alignments

Query, 632 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 664 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  314 bits (804), Expect = 9e-90
 Identities = 210/535 (39%), Positives = 298/535 (55%), Gaps = 27/535 (5%)

Query: 116 NGKAIPGKYDPRTRPWYQQGKATT--QLDVTDIYIDDGSGHK----VISILKN-LGDGVV 168
           N  A P  Y+   +PW++ G AT   +      Y DD S        ++I KN +  GV 
Sbjct: 137 NSDAAPNYYE---QPWHKGGMATPPGKCAWAAAYKDDASAEPRTNCAMAIQKNGVPYGVS 193

Query: 169 LGDIELTYLHDVVSAIDYP-GAVALITDQTGKVLASES-----------PTLVSGSRFSD 216
             D+ L + +++V+  +    A  LI +  GK++++ S             L + S F+ 
Sbjct: 194 TIDVTLGFFNELVARKEADLSAEMLIVEGDGKIISNSSRISGPIVLKNISELAATSPFA- 252

Query: 217 FGLPQVQQKIIGSDEVMQEYRIDGVDKLGFSKAIPLVNGKQWFLFIGLDKSNAYAVVDQA 276
               QV+  +   D+ +Q    D   +       P + G  WFL   L      A  D  
Sbjct: 253 ---AQVKAGLAKRDQPLQRVEFDNKGEASTFFMRP-IEGSPWFLATALPTRLITAQRDDV 308

Query: 277 LTSALVSSAIMLLCAISILLGVLYLLYRPILSLKAMVTELSKGNGDLTKRLEIHCEDDLG 336
           L++  +    M++  + + L  +  L   +  LK  +  LS G+ DLT+R+ I  ED+LG
Sbjct: 309 LSTLSLLQIPMVILLVLMQLYAIRQLTNRMKVLKGNIDALSTGDADLTRRITIRAEDELG 368

Query: 337 QISMGINQFIANLQAMMREVLQASAHISGSVERLNGETETNRHILSAHTKETEQIVAAVE 396
            I   +N+FIA LQ M+ EV QA+  ++ S+  L   +     IL  H  ET+Q V A+ 
Sbjct: 369 AIGHSVNRFIAYLQDMIGEVTQATGAMASSLGDLQRTSAHTSEILMRHASETDQTVTAIT 428

Query: 397 EMSATANDVAQNGSETASFTQLTNEQALASKQVVAQATETVNRLVREVEHTADKIGQIDR 456
           +MS+TA  VAQN +ETA+FTQ  NE A  S+ VV +A+ +V  L+ EV     K+  + +
Sbjct: 429 QMSSTAESVAQNAAETAAFTQRANEHADRSRVVVGEASNSVVALIDEVASATRKVESMQQ 488

Query: 457 DTINITQVLKVIGDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQDSTAE 516
           D   IT++L VIG IA QTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQ ST+E
Sbjct: 489 DAQRITEILGVIGAIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQASTSE 548

Query: 517 IEETLSNLRDASNSAIHSMEVTKQTCLETASTTERVATDLDAIGSSVNQINDLNTQIATA 576
           I E L+ L    +S++ +ME T+ +C   A  T RV + LD +  SV+QIN L+TQIATA
Sbjct: 549 INEMLTRLTQGVSSSVSAMENTQASCQSAADATSRVNSGLDEMAGSVSQINSLSTQIATA 608

Query: 577 AEEQSSVSAEITRNMSAICDMANELARSGESSRNETVNLATANQQLEQIVGQFKL 631
           AE+QS+V+ EI R+M  I  M  EL  SG +S   T  L  AN ++  I+G+FK+
Sbjct: 609 AEQQSAVTEEINRSMVQIRHMVEELVESGLASETNTRQLLDANTRVNAIMGRFKV 663