Pairwise Alignments

Query, 632 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 560 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  247 bits (630), Expect = 1e-69
 Identities = 142/404 (35%), Positives = 239/404 (59%), Gaps = 18/404 (4%)

Query: 241 VDKLGFSKAIPLVNGKQWFLFIG----LDKSNAYAVVDQA---------LTSALVSSAIM 287
           V KLG+++ +      +W + IG    LD   A   V Q          L S +  +A++
Sbjct: 162 VPKLGYTEYL-----SKWDMAIGTSVNLDGVEAQVAVVQTEVRERMEGVLLSIVGVAAVV 216

Query: 288 LLCAISILLGVLYLLYRPILSLKAMVTELSKGNGDLTKRLEIHCEDDLGQISMGINQFIA 347
           LL   ++ L V   + RP+  +KA + +++ G GDLT+RL I  +D+LG+++   N+F+ 
Sbjct: 217 LLVIAAVGLFVANTILRPLHLMKANLDDIAAGEGDLTRRLAITSQDELGELAGSFNRFVD 276

Query: 348 NLQAMMREVLQASAHISGSVERLNGETETNRHILSAHTKETEQIVAAVEEMSATANDVAQ 407
            + +++R++ + ++ ++G V +++ + + +   +     ET+Q+  A+ EMSA A +VA+
Sbjct: 277 KIHSLVRQITEMTSQLTGLVNQVSDQAQRSDQAMERQRHETDQVATAINEMSAAAQEVAK 336

Query: 408 NGSETASFTQLTNEQALASKQVVAQATETVNRLVREVEHTADKIGQIDRDTINITQVLKV 467
           +    A   Q T+E+  A+K+VVA +   ++ LV+++  +   +  + +D  +I  VL V
Sbjct: 337 SAQGAAVAAQQTDEEGQAAKRVVAGSISQIHALVKDIRSSGVSLDSLQQDVSSIVSVLGV 396

Query: 468 IGDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQDSTAEIEETLSNLRDA 527
           I  IADQTNLLALNAAIEAARAGE GRGFAVVADEVRALA+RTQ ST EI+  +  L+  
Sbjct: 397 IRSIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQSTQEIQGMIDRLQAG 456

Query: 528 SNSAIHSMEVTKQTCLETASTTERVATDLDAIGSSVNQINDLNTQIATAAEEQSSVSAEI 587
           + SA+ +M  + +    T++   +    LD +   +  IN +N QIA+AAEEQ++V+ EI
Sbjct: 457 TQSAVDAMRRSSEAGDGTSAQANQAGASLDTMAQLIGTINSMNAQIASAAEEQTAVAEEI 516

Query: 588 TRNMSAICDMANELARSGESSRNETVNLATANQQLEQIVGQFKL 631
            R++  I    + +A   +     + +LA   Q+L ++VGQF++
Sbjct: 517 NRSVHQIAVAVDSVADETQLGAQTSRSLADLGQRLGKLVGQFRI 560