Pairwise Alignments

Query, 632 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 629 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25-INTG

 Score =  261 bits (666), Expect = 9e-74
 Identities = 172/633 (27%), Positives = 319/633 (50%), Gaps = 19/633 (3%)

Query: 5   KSLVASMVTLVALCLLISNWLSYVQIKEATIARVNDKLTGVTRNESAKVATWFGAKAQAM 64
           K L+A+ + ++A   L + +  Y+Q + A    +N+ L  +    ++ + TW   +   +
Sbjct: 10  KILLAASLIVIAAFALFTLYNDYLQ-RNAIRDDLNNYLHEMGDVTASNIQTWLTGRIALV 68

Query: 65  DELARHYRLGSYQDNYVNTARLATDLSGVARIYFGFDDGSAYSTETGDKWLNGKAIPGKY 124
           +  A++  +                 S     Y G D   A++     K      +P  +
Sbjct: 69  ENAAQNIAINPEPSVVAGLLEQKALTSAFMATYVG-DSKGAFTIRPDTK------MPDGF 121

Query: 125 DPRTRPWYQQGKATTQLDVTDIYIDDGSGHKVISILK-----NLGDGVVLGDIELTYLHD 179
           DPR RPWY+  +++    +T+ YID  +G  +IS+           GVV GD+ L  L D
Sbjct: 122 DPRVRPWYKGAQSSNGSTLTEPYIDAATGKLIISVATPSTQGTQSIGVVGGDLSLQTLVD 181

Query: 180 VVSAIDYPG-AVALITDQTGKVLASESPTLVSGSRFSDFGLPQVQQKIIGSDEVMQEYRI 238
            + A+++ G   A +    GKVL      LV  +    +  P+   KI      ++    
Sbjct: 182 NIGALNFGGMGYAFLVSADGKVLVHPDKNLVMKTLADVY--PKNTPKISPDFSEVEANGK 239

Query: 239 DGVDKLGFSKAIPLVNGKQWFLFIGLDKSNAYAVVDQALTSALVSSAIMLLCAISILLGV 298
           D +      K +P VN   W+L I +DK  ++A++ +  TSA++++ I ++  I++L  +
Sbjct: 240 DTIVTFIPIKGLPSVN---WYLGIAVDKDKSFAMLSEFRTSAVIATLIAVVIIIALLGML 296

Query: 299 LYLLYRPILSLKAMVTELSKGNGDLTKRLEIHCEDDLGQISMGINQFIANLQAMMREVLQ 358
           + +L +P+  +   + +++ G GDLT+RL I   D+ G +    N+F+  +   +REV  
Sbjct: 297 IRILLQPLHVMTRAMQDIADGEGDLTRRLTIQNHDEFGTLGNAFNRFVERIHTSIREVSS 356

Query: 359 ASAHISGSVERLNGETETNRHILSAHTKETEQIVAAVEEMSATANDVAQNGSETASFTQL 418
           A+  ++    R+   + ++          T  + AA+ E+ A A ++A+N ++ +     
Sbjct: 357 ATEQVNEVALRVVSASNSSMVNSDEQANRTSSVAAAINELGAAAQEIARNAAQASHQASD 416

Query: 419 TNEQALASKQVVAQATETVNRLVREVEHTADKIGQIDRDTINITQVLKVIGDIADQTNLL 478
               A   + VV +  + +N+L   +  ++  I  ++  T+NI Q+L+VI  I+ QTNLL
Sbjct: 417 ARHLAEDGQHVVERNIQAMNQLSAMISASSSNIEALNSKTVNIGQILEVITSISQQTNLL 476

Query: 479 ALNAAIEAARAGEQGRGFAVVADEVRALAARTQDSTAEIEETLSNLRDASNSAIHSMEVT 538
           ALNAAIEAARAGE GRGFAVVADEVR LA RTQ+S  ++++ +  L+  +  ++ +M  +
Sbjct: 477 ALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQKMIEELQVGARESVSTMSES 536

Query: 539 KQTCLETASTTERVATDLDAIGSSVNQINDLNTQIATAAEEQSSVSAEITRNMSAICDMA 598
           ++  L++          L+++   + +I+ +N  +ATA EEQ+SV   I  +++ I  + 
Sbjct: 537 QRHSLDSVDIANLAGERLNSVTQRIGEIDGMNQSVATATEEQTSVVESINMDITEINTLN 596

Query: 599 NELARSGESSRNETVNLATANQQLEQIVGQFKL 631
            E   + +S+     +L     +L+Q+VG F++
Sbjct: 597 QEGVENLQSTLRACADLEQQAARLKQLVGSFRI 629