Pairwise Alignments

Query, 291 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 301 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score =  142 bits (357), Expect = 1e-38
 Identities = 104/295 (35%), Positives = 139/295 (47%), Gaps = 10/295 (3%)

Query: 2   RKIPPLRALQVFEAAARLQHFSRAAQELCITQSAVSHQVRLLEEHFALPLFRREGRSLRL 61
           R +P + ALQ FEA  R   F+RAA+EL +TQSAVS QV  LEE     LF+R  R L+L
Sbjct: 5   RHLPSIAALQCFEAVTRHLSFTRAAEELNLTQSAVSKQVAQLEELVQHLLFQRVRRRLQL 64

Query: 62  TDKGEQLFQETARIFN--ELGELNLRLLGEKPEALRLAVYSSFAVKWLIPRLSGFRRLHP 119
           T  G     E  +I    E+    LR  G + E LR++  S+F  +WL+PRL G+R  HP
Sbjct: 65  TPAGALYLAEVRKILTQIEMSTHFLRSYGGETEVLRVSTPSTFGARWLVPRLKGWRLRHP 124

Query: 120 GIQVRLDMITE---DPVLSHSSADMFITGQQDQKGYWQQLLHAERLIPVCSPELISSSDK 176
              + LD+I E   D ++       F  GQ    G     L  E L+PVC+PE +     
Sbjct: 125 --HIHLDLINEQESDDLIKGRCDVSFYFGQAAMPGAESVKLFGEELVPVCAPESLPDEPL 182

Query: 177 LDLDWLSTQQLLTVDEGPLGLDWQRWFEHHRVAQPEEEQQQLFSHVLMAIEAAIAGQGVA 236
            D   LS   LL     P    W  WFE              F    M I AA  G GVA
Sbjct: 183 ADPTQLSELVLLQNAFRPEA--WHEWFESQGYHTDHSYHGPRFETFYMCIRAAQVGCGVA 240

Query: 237 LASDFMVLDDIAKQRLV-ALPFAGIDTGFEFNFLCKQRRLQEPAIAAFVHWLTQQ 290
           L   F+V +++A+ +LV A  +A   T   +     +     P I  F+ W+ +Q
Sbjct: 241 LLPRFLVEEELAEGKLVIAWDYALPSTNSAYYLSYPEHTADVPKIRVFLQWMLEQ 295