Pairwise Alignments

Query, 291 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 307 a.a., Transcriptional Regulator, LysR family (NCBI) from Rhodospirillum rubrum S1H

 Score =  140 bits (354), Expect = 3e-38
 Identities = 93/289 (32%), Positives = 141/289 (48%), Gaps = 6/289 (2%)

Query: 2   RKIPPLRALQVFEAAARLQHFSRAAQELCITQSAVSHQVRLLEEHFALPLFRREGRSLRL 61
           R +PPL AL+ F AAA+   F++AA++L +TQ+AVSHQ+R LE+   + LFRR  + + +
Sbjct: 3   RDLPPLNALRAFTAAAKRLSFTQAAEDLGVTQAAVSHQIRGLEDWLGVALFRRRNKQVVM 62

Query: 62  TDKGEQLFQETARIFNELGELNLRLLGEKPEA--LRLAVYSSFAVKWLIPRLSGFRRLHP 119
           T+ G+       +  +E+ E    L+   P A  L ++   SFA+KWL+ RL GF   +P
Sbjct: 63  TEAGQVYALAIGQALDEIAEATAALVRNDPRAGMLTISTMPSFAIKWLVQRLGGFINANP 122

Query: 120 GIQVRLDMITEDPVLSHSSADMFITGQQD-QKGYWQQLLHAERLIPVCSPELISSSDKLD 178
            I+VRL    E    +    D+ I   ++        LL  E L PVCSP L+     L 
Sbjct: 123 DIEVRLHTTRELVNFATEGIDVAIRMTREVGDDLHADLLLEEELFPVCSPALMRGIRPLR 182

Query: 179 LDWLSTQQLLTVDEGPLGLDWQRWFEHHRVAQPEEEQQQLFSHVLMAIEAAIAGQGVALA 238
                +Q LL  D   +G+ W  W +          +   +    +AI+A I  QGV L 
Sbjct: 183 QPSDLSQHLLLQD---VGISWVSWLDPAGALDVRPARGPGYLDSALAIQACIESQGVMLG 239

Query: 239 SDFMVLDDIAKQRLVALPFAGIDTGFEFNFLCKQRRLQEPAIAAFVHWL 287
              MV DD+   RLV      + +  ++  +C    L  P + AF  W+
Sbjct: 240 RTVMVEDDLKAGRLVEPFTLRVPSPMKYWLVCPPGHLARPGVRAFREWI 288