Pairwise Alignments

Query, 291 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 294 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  367 bits (941), Expect = e-106
 Identities = 187/290 (64%), Positives = 222/290 (76%), Gaps = 1/290 (0%)

Query: 1   MRKIPPLRALQVFEAAARLQHFSRAAQELCITQSAVSHQVRLLEEHFALPLFRREGRSLR 60
           MRK+PPLRALQVFE AAR QHFS+AA ELCITQSAVSHQVR+LEE+F   LF R+GR L+
Sbjct: 5   MRKLPPLRALQVFETAARQQHFSKAATELCITQSAVSHQVRVLEEYFGEQLFDRQGRKLQ 64

Query: 61  LTDKGEQLFQETARIFNELGELNLRLLGEKPEALRLAVYSSFAVKWLIPRLSGFRRLHPG 120
           LT KG+ LF E  RIFNEL +LNL++     + L LAVYSSFAVKWLIPRL+ FRR +P 
Sbjct: 65  LTPKGQSLFIELERIFNELSDLNLKIRDTPNQQLCLAVYSSFAVKWLIPRLADFRRQYPS 124

Query: 121 IQVRLDMITEDPVLSHSSADMFITGQQDQKGYWQQLLHAERLIPVCSPELISSSDKLDLD 180
           +++RL+MIT+DP LS S+AD+FI G+ +Q+GYWQQLLH ERLIPVCSP L     +++L 
Sbjct: 125 VKIRLEMITQDPDLSTSTADIFIAGKLNQRGYWQQLLHKERLIPVCSPNLYPKWREINLG 184

Query: 181 WLSTQQLLTVDEGPLGLDWQRWFEHHRVAQPEEEQQQLFSHVLMAIEAAIAGQGVALASD 240
               Q LL VDEGPLGLDW +W   H++     EQQ LFSH++MAIEAAIAGQG+ALA D
Sbjct: 185 NFQQQALLIVDEGPLGLDWHKWSSAHKIPL-NNEQQHLFSHIVMAIEAAIAGQGIALAPD 243

Query: 241 FMVLDDIAKQRLVALPFAGIDTGFEFNFLCKQRRLQEPAIAAFVHWLTQQ 290
           FMV  DI+  RLVA+    + TGFEF FLCKQRRL EPAIAAF  WL  Q
Sbjct: 244 FMVAGDISTGRLVAVNLPDVHTGFEFCFLCKQRRLNEPAIAAFSSWLKSQ 293