Pairwise Alignments

Query, 291 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 331 a.a., transcriptional regulator, LysR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  158 bits (399), Expect = 2e-43
 Identities = 102/289 (35%), Positives = 143/289 (49%), Gaps = 4/289 (1%)

Query: 4   IPPLRALQVFEAAARLQHFSRAAQELCITQSAVSHQVRLLEEHFALPLFRREGRSLRLTD 63
           +PPL AL  FEAAARL   +RAA+ELC+TQ+AVS QVR LE H  L LF R G+ LRLTD
Sbjct: 5   LPPLNALVAFEAAARLGSITRAARELCVTQAAVSQQVRRLEGHLGLALFARGGQGLRLTD 64

Query: 64  KGEQLFQETARIFNELGELNLRLLGEKPE-ALRLAVYSSFAVKWLIPRLSGFRRLHPGIQ 122
           +G +     A     +      L+ E     L +    SFA +W++PR + F   HP I 
Sbjct: 65  EGRRYLDGIAGPLASIRRATDALMAEDTSGVLTVIAAPSFANRWIVPRFNRFYERHPDID 124

Query: 123 VRLDMITEDPVLSHSSADMFITGQQDQKGYWQQLLHAERLIPVCSPELISSSDKLDLDWL 182
           +R+      P L      +      D+ G +   L  ER+ PVCSPEL+ ++      +L
Sbjct: 125 LRIGPAPVAPELGRGVDIIIYHDIGDRPGTYSMPLMGERIFPVCSPELLDANGGEAASFL 184

Query: 183 STQQLLTVDEGPLGLDWQRWFEHHRVAQPEEEQQQLFSHVLMAIEAAIAGQGVALASDFM 242
             Q LL      +GL W+ W E   +          F    +A+ AA+ G GVAL    +
Sbjct: 185 RGQLLLRHARDGMGL-WEAWLEKAGLGDEGLRFGPRFDFSYLALAAALDGAGVALGRTLL 243

Query: 243 VLDDIAKQRL-VALPFAGIDTGFEFNFLCKQRRLQEPAIAAFVHWLTQQ 290
           V +D+A  RL V +P   +     + F C +   + P +AAF  WL  +
Sbjct: 244 VAEDLAAGRLCVPVPLTMV-APRPYWFCCAEAHAERPRVAAFREWLVDE 291