Pairwise Alignments

Query, 224 a.a., ribulose-phosphate 3-epimerase (RefSeq) from Shewanella loihica PV-4

Subject, 219 a.a., ribulose-phosphate 3-epimerase from Methanococcus maripaludis S2

 Score =  164 bits (416), Expect = 9e-46
 Identities = 84/216 (38%), Positives = 134/216 (62%), Gaps = 8/216 (3%)

Query: 5   LIAPSILSADFARLGEDVEAVLKAGADVVHFDVMDNHYVPNLTIG---PMVCKALRDYGV 61
           +I  SILSAD+  + E+V+   +   D  H D+MD H+VPNL++G   P   K++ D   
Sbjct: 3   MIGASILSADYGHMAEEVKKAEEGNVDFFHVDIMDGHFVPNLSMGLRVPHYLKSITD--- 59

Query: 62  TADIDVHLMVKPVDRIIPDFVDAGASIITFHPEASEHIDRTLQLIKESGCKAGLVFNPAT 121
              IDVHLMV+  D  IP   DA A +I FH E+S+++ RT+ +IKE   K  +  NP+T
Sbjct: 60  -VPIDVHLMVENPDLFIPKLADA-ADMIAFHAESSKYLFRTVDMIKEHDAKPIVALNPST 117

Query: 122 PLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRERIDASGFDIRLEVDGGVK 181
           P+  +++V++ L  +L+M+V PGF GQSFI   + K+  ++ +I   G+D ++ VDGG+ 
Sbjct: 118 PIGNVEYVLENLYGVLVMTVEPGFSGQSFINPMIKKIDNLKNKILTEGYDTKIFVDGGIN 177

Query: 182 VDNIAEIAAAGADMFVAGSAIFNKPDYKAVIDEMRS 217
           ++   +   AGAD  +A SAI+ K D K  ++++R+
Sbjct: 178 LETAPKAVEAGADGLIAASAIYGKEDVKKAVNDLRN 213